KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:22:44 2014 Check: 00 .. Name: bmy_03376T0/1-331 Len: 434 Check: 191 Weight: 1.00 Name: BACU007458/1-374 Len: 434 Check: 3985 Weight: 1.00 Name: ENSBTAP00000004007/1-205 Len: 434 Check: 2459 Weight: 1.00 Name: ENSP00000357392/1-205 Len: 434 Check: 6558 Weight: 1.00 Name: ENSTTRP00000015321/1-205 Len: 434 Check: 6594 Weight: 1.00 // 1 50 bmy_03376T0/1-331 GGAGCRAAPA QKAESRGGGP RAVSTVLSAP RRKPAGTQTR RSPSSPPGLA BACU007458/1-374 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000004007/1-205 ---------- ---------- ---------- ---------- ---------- ENSP00000357392/1-205 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015321/1-205 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_03376T0/1-331 RPRAMEFLWA PLLGLCCSLA AADRHTVFWN SSNPKVGEGP WFRSEDYTVH BACU007458/1-374 ----MEFLWA PLLGLCCSLA AADRHTVFWN SSNPK----- -FRSEDYTVH ENSBTAP00000004007/1-205 ----MEFFWA SLLGLCCSLA AANRHTVFWN SSNPK----- -FWNEDYTVH ENSP00000357392/1-205 ----MEFLWA PLLGLCCSLA AADRHTVFWN SSNPK----- -FRNEDYTIH ENSTTRP00000015321/1-205 ----MEFLWA PLLGLCCSLA AADRHTVFWN SSNPK----- -FRNEDYTVH 101 150 bmy_03376T0/1-331 VQLNDYLDII CPHYEDDSVA DAAMERYTLY LVEHEQYQLC QPQSKDQVRW BACU007458/1-374 VQLNDYLDII CPHYEDDSVA DAAMERYTLY LVEHEQYQLC QPQSKDQVRW ENSBTAP00000004007/1-205 VRIDDYLDII CPHYEDNSVP DAAMEQYTLY LVEHEQYQLC QPQPKDHARW ENSP00000357392/1-205 VQLNDYVDII CPHYEDHSVA DAAMEQYILY LVEHEEYQLC QPQSKDQVRW ENSTTRP00000015321/1-205 VQLNDYLDII CPHYEDESVA DAAMERYTLY LVEREQYQLC QPQSKDQVRW 151 200 bmy_03376T0/1-331 QCNQPSARHG PEKLSEKFQR FTPFTLGKEF KEGHSYYYIS KPIHHQEDQC BACU007458/1-374 QCNQPSARHG PEKLSEKFQR FTPFTLGKEF KEGHSYYYIS KPIHHQEDQC ENSBTAP00000004007/1-205 FCKSPKAKHG PEKLSEKFHR FTGFTLSKDF KEGHSYYYIS KPIHHQEDRC ENSP00000357392/1-205 QCNRPSAKHG PEKLSEKFQR FTPFTLGKEF KEGHSYYYIS KPIHQHEDRC ENSTTRP00000015321/1-205 QCNQPSARHG PEKLSEKFQR FTPFTLGKEF KEGHSYYYIS KPIHYQEDQC 201 250 bmy_03376T0/1-331 LRLKVTVSGK ISECHSLVGL LAASLSWAWS SDLGWLGSPT AQPTQHSHPS BACU007458/1-374 LRLKVTVSGK ISCTPLWKFL LSNLRPTRTL SALGFGVLLS SDLKHMRMTR ENSBTAP00000004007/1-205 LRLKVMIAGK ITHSP----- ---------- -------QAH PNAQEKRLPA ENSP00000357392/1-205 LRLKVTVSGK ITHSP----- ---------- -------QAH DNPQEKRLAA ENSTTRP00000015321/1-205 LRLKVNVNGK ITHSP----- ---------- -------QAH ANAQEKRLPA 251 300 bmy_03376T0/1-331 ASLVYQ---- ---------- ---------- ---------- ---------- BACU007458/1-374 SVDSVQFLPF LTTDVNNLSW LSYGALKGNW TLIVVNAVGA VLQTLYILVY ENSBTAP00000004007/1-205 -----D---- ---------- ---------- ---------- ---------- ENSP00000357392/1-205 -----D---- ---------- ---------- ---------- ---------- ENSTTRP00000015321/1-205 -----D---- ---------- ---------- ---------- ---------- 301 350 bmy_03376T0/1-331 ---------- ---------- ---------- -VPDLRPXFQ L--------- BACU007458/1-374 LHYCHRKHAV LLQTATLLGV LVLGFGYFWL LVPDTETRLQ QLGLFCSVFT ENSBTAP00000004007/1-205 ---------- ---------- ---------- -DPEVQ---- ---------- ENSP00000357392/1-205 ---------- ---------- ---------- -DPEVR---- ---------- ENSTTRP00000015321/1-205 ---------- ---------- ---------- -DPEVQ---- ---------- 351 400 bmy_03376T0/1-331 --TVLRPMPM HRRRDFQQMT QRCRFYIALV TVPPPASSHS PGLCCSCHSC BACU007458/1-374 ISMYLSPLAD LAKVIRTKST QRLSFSLTIA TLLTSASWTF YGFRLKDPYI ENSBTAP00000004007/1-205 ---VLHSIG- ------HSAA PRL-FPLAWA VLLLPF---- --LLLQIP-- ENSP00000357392/1-205 ---VLHSIG- ------HSAA PRL-FPLAWT VLLLPL---- --LLLQTP-- ENSTTRP00000015321/1-205 ---VLHSIG- ------HSAA PRL-FPLAWA VLLLPF---- --LLLQTL-- 401 450 bmy_03376T0/1-331 CCKPHEGVCR THCKNWN--- ---------- ---- BACU007458/1-374 VVPNLPGILT SFIRFWLFWK YPQEQDRNYQ LLQT ENSBTAP00000004007/1-205 ---------- ---------- ---------- ---- ENSP00000357392/1-205 ---------- ---------- ---------- ---- ENSTTRP00000015321/1-205 ---------- ---------- ---------- ----