KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:21:57 2014 Check: 00 .. Name: ENSTTRP00000011680/1-718 Len: 792 Check: 2375 Weight: 1.00 Name: ENSP00000307288/1-719 Len: 792 Check: 4264 Weight: 1.00 Name: ENSBTAP00000003728/1-719 Len: 792 Check: 3852 Weight: 1.00 Name: bmy_13977T0/1-792 Len: 792 Check: 2099 Weight: 1.00 Name: BACU012094/1-719 Len: 792 Check: 2884 Weight: 1.00 // 1 50 ENSTTRP00000011680/1-718 MALKDYALEK EKVKKFLQEF YQDDEFGKKQ FKYGNQLVRL AHREQVAVYI ENSP00000307288/1-719 MALKDYALEK EKVKKFLQEF YQDDELGKKQ FKYGNQLVRL AHREQVALYV ENSBTAP00000003728/1-719 MALKDYVLEK DKVKKFLQEF YQDDESGKKQ FKYGNQLVQL AHREQVAMYV bmy_13977T0/1-792 MALKDYALEK EKVKKFLQEF YQDDEFGKKQ FKYGNQLVRL AHREQVAVYV BACU012094/1-719 MALKDYALEK EKVKKFLQEF YQDDEFGKKQ FKYGNQLVRL AHREQVAVYI 51 100 ENSTTRP00000011680/1-718 DLDDVAEDDP ELVDSICENT KRYAKLFADA IQELLPQYKE REVVNKDVLD ENSP00000307288/1-719 DLDDVAEDDP ELVDSICENA RRYAKLFADA VQELLPQYKE REVVNKDVLD ENSBTAP00000003728/1-719 DLDDIAEDDP ELVDSICENT KRYARLFADA VQELLPQYKE REVVNKDVLD bmy_13977T0/1-792 DLDDVAEDDP ELVDSICENT KRYARLFADA VQELLPQYKE REVVNKDVLD BACU012094/1-719 DLDDVAEDDP ELVDSICENT KRYARLFADA VQELLPQYKE REVVNKDVLD 101 150 ENSTTRP00000011680/1-718 VYIEHRLMME QRTRDPGAAR SPQNQYPPEL MRRFELYFQG PSSNKPRVIR ENSP00000307288/1-719 VYIEHRLMME QRSRDPGMVR SPQNQYPAEL MRRFELYFQG PSSNKPRVIR ENSBTAP00000003728/1-719 VYIEHRLMME QRSRDPGAAR SPQNQYPPEL MRRFELYFQG PSSNKPRVIR bmy_13977T0/1-792 VYIEHRLMME QRSRDPGAAR SPQNQYPPEL MRRFELYFQG PSSNKPRVIR BACU012094/1-719 VYIEHRLMME QRSRDPGAAR SPQNQYPPEL MRRFELYFQG PSSNKPRVIR 151 200 ENSTTRP00000011680/1-718 EVRADSVGKL VTVRG-VTRV SEVKLRMVVA TYTCDQCGAE TYQPIQSPTF ENSP00000307288/1-719 EVRADSVGKL VTVRGIVTRV SEVKPKMVVA TYTCDQCGAE TYQPIQSPTF ENSBTAP00000003728/1-719 EVRADSVGKL VTVRGIVTRV SEVKPRMVVA TYTCDQCGAE TYQPIQSPTF bmy_13977T0/1-792 EVRADSVGKL VTVRGIVTRV SEVKPRMVVA TYTCDQCGAE TYQPIQSPTF BACU012094/1-719 EVRADSVGKL VTVRGIVTRV SEVKPRMVVA TYTCDQCGAE TYQPIQSPTF 201 250 ENSTTRP00000011680/1-718 MPLIMCPSQE CQTNRSGGRL YLQTRGSKFI KFQDMKMQEH SDQVPVGNIP ENSP00000307288/1-719 MPLIMCPSQE CQTNRSGGRL YLQTRGSRFI KFQEMKMQEH SDQVPVGNIP ENSBTAP00000003728/1-719 MPLIMCPSQE CQTNRSGGRL YLQTRGSKFI KFQEMKMQEH SDQVPVGNIP bmy_13977T0/1-792 MPLIMCPSQE CQTNRSGGRL YLQTRGSKFI KFQEMKMQEH SDQVPVGNIP BACU012094/1-719 MPLIMCPSQE CQTNRSGGRL YLQTRGSKFI KFQEIKMQEH SDQVPVGNIP 251 300 ENSTTRP00000011680/1-718 RSITVLVEGE NTRIAQPGDH VSVTGIFLPV LRAGFRQMVQ GLLSETYLEA ENSP00000307288/1-719 RSITVLVEGE NTRIAQPGDH VSVTGIFLPI LRTGFRQVVQ GLLSETYLEA ENSBTAP00000003728/1-719 RSITVLVEGE NTRIAQPGDH VSVTGIFLPI LRTGFRQMVQ GLLSETYLEA bmy_13977T0/1-792 RSITVLVEGE NTRIAQPGDH VSVTGIFLPV LRAGFRQMVQ GLLSETYLEA BACU012094/1-719 RSITVLVEGE NTRIAQPGDH VSVTGIFLPV LRAGFRQMVQ GLLSETYLEA 301 350 ENSTTRP00000011680/1-718 HRIVKMSKSE DDESGAGELS REELRQIAEE DFYEKLAASI APEIYGHEDV ENSP00000307288/1-719 HRIVKMNKSE DDESGAGELT REELRQIAEE DFYEKLAASI APEIYGHEDV ENSBTAP00000003728/1-719 HRIVKMSKSE EDESGAGELT REELRQITEE DFYEKLAASI APEIYGHEDV bmy_13977T0/1-792 HRIVKMSKSE DDESGAGELS REELRQIAEE DFYEKLAASI APEIYGHEDV BACU012094/1-719 HRIVKMSKSE DDESGAGELS REELRQIAEE DFYEKLAASI APEIYGHEDV 351 400 ENSTTRP00000011680/1-718 KKALLLLLVG GVDQSPRGMK IR-------- ---------- ---------- ENSP00000307288/1-719 KKALLLLLVG GVDQSPRGMK IR-------- ---------- ---------- ENSBTAP00000003728/1-719 KKALLLLLVG GVDQSPRGMK IR-------- ---------- ---------- bmy_13977T0/1-792 KKALLLLLVG GVDQSPRGMK IRGECSVQEE RMGDQGQCPI GHRIKEQASW BACU012094/1-719 KKALLLLLVG GVDQSPRGMK IR-------- ---------- ---------- 401 450 ENSTTRP00000011680/1-718 ---------- ---------- ---------- ---------- -----GNINI ENSP00000307288/1-719 ---------- ---------- ---------- ---------- -----GNINI ENSBTAP00000003728/1-719 ---------- ---------- ---------- ---------- -----GNINI bmy_13977T0/1-792 LHGHRVGLKE MVLGMMGADL ESTFLCVWTT CIEGIVIQGL PPLPPGNINI BACU012094/1-719 ---------- ---------- ---------- ---------- -----GNINI 451 500 ENSTTRP00000011680/1-718 CLMGDPGVAK SQLLSYIDRL APRSQYTTGR GSSGVGLTAA VLRDSMSGEL ENSP00000307288/1-719 CLMGDPGVAK SQLLSYIDRL APRSQYTTGR GSSGVGLTAA VLRDSVSGEL ENSBTAP00000003728/1-719 CLMGDPGVAK SQLLSYIDRL APRSQYTTGR GSSGVGLTAA VLRDSVSGEL bmy_13977T0/1-792 CLMGDPGVAK SQLLSYIDRL APRSQYTTGR GSSGVGLTAA VLRDSMSGEL BACU012094/1-719 CLMGDPGVAK SQLLSYIDRL APRSQYTTGR GSSGVGLTAA VLRDSMSGEL 501 550 ENSTTRP00000011680/1-718 TLEGGALVLA DQGVCCIDEF DKMAEADRTA IHEVMEQQTI SIAKAGILTT ENSP00000307288/1-719 TLEGGALVLA DQGVCCIDEF DKMAEADRTA IHEVMEQQTI SIAKAGILTT ENSBTAP00000003728/1-719 TLEGGALVLA DQGVCCIDEF DKMAEADRTA IHEVMEQQTI SIAKAGILTT bmy_13977T0/1-792 TLEGGALVLA DQGVCCIDEF DKMAEADRTA IHEVMEQQTI SIAKAGILTT BACU012094/1-719 TLEGGALVLA DQGVCCIDEF DKMAEADRTA IHEVMEQQTI SIAKAGILTT 551 600 ENSTTRP00000011680/1-718 LNARCSILAA ANPAYGRYNP RRSLEQNIQL PAALLSRFDL LWLIQDRPDR ENSP00000307288/1-719 LNARCSILAA ANPAYGRYNP RRSLEQNIQL PAALLSRFDL LWLIQDRPDR ENSBTAP00000003728/1-719 LNARCSILAA ANPAYGRYNP RRSLEQNIQL PAALLSRFDL LWLIQDRPDR bmy_13977T0/1-792 LNARCSILAA ANPAYGRYNP RRSLEQNIQL PAALLSRFDL LWLIQDRPDR BACU012094/1-719 LNARCSILAA ANPAYGRYNP RRSLEQNIQL PAALLSRFDL LWLIQDRPDR 601 650 ENSTTRP00000011680/1-718 DNDLRLAQHI TYVHQHSRQP PAQFEPLDMK LMRRYIAMCQ EKQPTVPESL ENSP00000307288/1-719 DNDLRLAQHI TYVHQHSRQP PSQFEPLDMK LMRRYIAMCR EKQPMVPESL ENSBTAP00000003728/1-719 DNDLRLAQHI TYVHQHSRQP PAQFEPLDMK LMRRYIAMCR EKQPAVPESL bmy_13977T0/1-792 DNDLRLAQHI TYVHQHSRQP PAQFEPLDMK LMRRYIATCR EKQPTVPESL BACU012094/1-719 DNDLRLAQHI TYVHQHSRQP PAQFEPLDMK LMRRYIATCR EKQPTVPESL 651 700 ENSTTRP00000011680/1-718 ADYITAAYVE MRREAWASKD ATYTSARTLL AILRLSTALA RLRMVETVEK ENSP00000307288/1-719 ADYITAAYVE MRREAWASKD ATYTSARTLL AILRLSTALA RLRMVDVVEK ENSBTAP00000003728/1-719 ADYITAAYVE MRREAWASKD ATYTSARTLL AILRLSTALA RLRMVDTVEK bmy_13977T0/1-792 ADYITAAYVE MRREAWASKD ATYTSARTLL AILRLSTALA RLRMVDTVEK BACU012094/1-719 ADYITAAYVE MRREAWASKD ATYTSARTLL AILRLSTALA RLRMVDTVEK 701 750 ENSTTRP00000011680/1-718 DDVNEATRLM ETSXXXXXXX XXXXXXTQRP ADVIFATVRE LASEGRSVRY ENSP00000307288/1-719 EDVNEAIRLM EMSKDSLLGD KGQTARTQRP ADVIFATVRE LVSGGRSVRF ENSBTAP00000003728/1-719 EDVNEAIRLM EMSKDSLLGD KGQTARTQRP ADVIFATVRE LVSEGQSVRF bmy_13977T0/1-792 EDVNEAIRLM EMSKDSLLGD KGQTARTQRP ADVIFATVRE LVSEGRSVRF BACU012094/1-719 EDVNEAIRLM EMSKDSLLGD KGQTARTQRP ADVIFATVRE LVSEGRSVRF 751 800 ENSTTRP00000011680/1-718 SEAEQRCVSR GFTPAQFQAA LDEYEELNVW QVNAARTRVT FV ENSP00000307288/1-719 SEAEQRCVSR GFTPAQFQAA LDEYEELNVW QVNASRTRIT FV ENSBTAP00000003728/1-719 SEAEQRCISR GFTPAQFQAA LDEYEELNVW QVNTARTRIT FV bmy_13977T0/1-792 SEAEQRCVSR GFTPAQFQAA LDEYEELNVW QVNTARTRIT FV BACU012094/1-719 SEAEQRCVSR GFTPAQFQAA LDEYEELNVW QVNTARTRIT FV