KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:58 2014 Check: 00 .. Name: ENSBTAP00000003457/1-304 Len: 419 Check: 9087 Weight: 1.00 Name: ENSP00000339692/1-321 Len: 419 Check: 5128 Weight: 1.00 Name: ENSTTRP00000011114/1-407 Len: 419 Check: 7999 Weight: 1.00 Name: bmy_14159T0/1-231 Len: 419 Check: 5215 Weight: 1.00 Name: BACU006356/1-368 Len: 419 Check: 544 Weight: 1.00 // 1 50 ENSBTAP00000003457/1-304 ---------- ---------- ---------- ---------- ---------- ENSP00000339692/1-321 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011114/1-407 EGDSEVGQGD CQDLIYNSES ANTLEVLGPT WTPVSFASFA APPGFPGALS bmy_14159T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU006356/1-368 ---------- ---------- ---------- ---------- ----MPRRSR 51 100 ENSBTAP00000003457/1-304 ---------- ---------- ---------- ---MKEDCPP SSHVPISDSK ENSP00000339692/1-321 ---------- ---------- ---------- ---MKEDCLP SSHVPISDSK ENSTTRP00000011114/1-407 AKSGCVLMAV SLWIICCWQN VYFAHFTNEE TEPSEARCLP RPH-HIPRAY bmy_14159T0/1-231 ---------- ---------- ---------- ---------- ---------- BACU006356/1-368 RCGRVSGDCE GKAAAAASGQ RDEWTARDNS EGRQRAHCPQ QPLLTAGRAA 101 150 ENSBTAP00000003457/1-304 SILK------ ------SELL SLLKTYNCYH EGKSSQLRRR EEEGALIIEG ENSP00000339692/1-321 SIQK------ ------SELL GLLKTYNCYH EGKSFQLRHR EEEGTLIIEG ENSTTRP00000011114/1-407 VCLS------ ---FFTSELL SLLKTYNCYH XXXXXXXXXX XEEGALIIEG bmy_14159T0/1-231 ---------- ---------- ---------M SGR------- ---------- BACU006356/1-368 AEVESENNPL PVHWDRSELL SLLKTYNCYH EGRSFQLRHR EEEGALIIEG 151 200 ENSBTAP00000003457/1-304 LLNISWGLKR PIRLQIQDDR ERVHL---SW TPGQSSCHS- KEPPVQDGRV ENSP00000339692/1-321 LLNIAWGLRR PIRLQMQDDR EQVHLPSTSW MPRRPSCPL- KEPSPQNGNI ENSTTRP00000011114/1-407 LLNISWGLRR PIRLQIQDDR ERVHLSPASW APGHPECQAG KEPPLQDGRV bmy_14159T0/1-231 ---------- ---------- ---------- ---------- KEPPLQDGRV BACU006356/1-368 LLNISWGLRR PIRLQIQDDR ERMHLSSASW APGRP----- KEPPLQDGRV 201 250 ENSBTAP00000003457/1-304 TAQEPSSQAG PQEESSRDRS EPVEEDEETP QLLRTKSDAA CVIQRRPRSR ENSP00000339692/1-321 TAQGPSIQPV HKAESSTDSS GPLEEAEEAP QLMRTKSDAS CMSQRRPKCR ENSTTRP00000011114/1-407 TAQEPGAQAG PREESSRDSS EPVEEDEETP QLMRTKSDAA CVIQRRPRCR bmy_14159T0/1-231 TAQEPSAQAG PREESSRDSS EPMEEDEETP QLMRTKSDAA CVIQRRPRCR BACU006356/1-368 TAQEPSAQAG PREESSRDSS EPMEEDEETP QLMRTKSDAA CVIQRRPRCR 251 300 ENSBTAP00000003457/1-304 APGEAQRTRR HRFSINGHFY NHKTSVFTPA YGSMTNVRVN STMTTLQVLT ENSP00000339692/1-321 APGEAQRIRR HRFSINGHFY NHKTSVFTPA YGSVTNVRVN STMTTLQVLT ENSTTRP00000011114/1-407 APGEAQRIRR HRFSINGHFY NHKTSVFTPA YGSMTNVRVN STMTTLQVLT bmy_14159T0/1-231 APGEAQRIRR HRFSINGHFY NHKTSVFTPA YGSMTNVRVN STMTTLQVLT BACU006356/1-368 APGEAQRIRR HRFSINGHFY NHKTSVFTPA YGSMTNVRVN STMTTLQVLT 301 350 ENSBTAP00000003457/1-304 LLLNKFRVEN GPSEFALYVV HESGERTKLK DCEYPLIARI LHGPCEKIAR ENSP00000339692/1-321 LLLNKFRVED GPSEFALYIV HESGERTKLK DCEYPLISRI LHGPCEKIAR ENSTTRP00000011114/1-407 LLLNKFRVEN GPSEFALYIV HESGERTKLK DSEYPLISRI LHGPCEKIAR bmy_14159T0/1-231 LLLNKFRVEN GPSEFALYII HESGERTKLK DSEYPLISRI LHGPCEKIAR BACU006356/1-368 LLLNKFRVEN GPSEFALYIV HESGERTKLK DSEYPLISRI LHGPCEKIAR 351 400 ENSBTAP00000003457/1-304 IFLMEADLGE EVPHDGSQL- ----PLGSEW APS------- SLVHTKL--- ENSP00000339692/1-321 IFLMEADLGV EVPHEVAQYI KFEMPVLDSF VEKLKEEEER EIIKLTMKFQ ENSTTRP00000011114/1-407 IFLMEADLGE EVPHEVAQYI KFEMPVLDSF VEKLKEEEER EIIKLTMKFQ bmy_14159T0/1-231 IFLMEADLGE EVPHDVAQYI KFEMPVLDSF VEKLKEEEER EIIKLTMKFQ BACU006356/1-368 IFLMEADLGE EVPHDVAQYI KFEMPVLDSF VEKLKEEEER EIIKLTMKFQ 401 450 ENSBTAP00000003457/1-304 -CRGVGGRRA ASSLETKPC ENSP00000339692/1-321 ALRLTMLQRL EQLVEAK-- ENSTTRP00000011114/1-407 ALRLTMLQRL EQLVEAK-- bmy_14159T0/1-231 ALRLTMLQRL EQLVEAK-- BACU006356/1-368 ALRLTMLQRL EQLVEAK--