KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:20:54 2014 Check: 00 .. Name: ENSBTAP00000003427/1-723 Len: 748 Check: 8065 Weight: 1.00 Name: bmy_14325T0/1-720 Len: 748 Check: 6440 Weight: 1.00 Name: ENSP00000409952/1-723 Len: 748 Check: 7356 Weight: 1.00 Name: ENSTTRP00000004044/1-721 Len: 748 Check: 1602 Weight: 1.00 Name: BACU012228/1-723 Len: 748 Check: 8024 Weight: 1.00 // 1 50 ENSBTAP00000003427/1-723 MAAAATMAAA ARELVLRAGA SDMEEEEGPL GSGPGLREPL QIGELDITSD bmy_14325T0/1-720 MAAAATMAAA ARELVLRAGA SDMEEEEGPL EGGPGLQEPL QLGELDITSD ENSP00000409952/1-723 MAAAATMAAA ARELVLRAGT SDMEEEEGPL AGGPGLQEPL QLGELDITSD ENSTTRP00000004044/1-721 MAAAANMAAA ARELVLRA-S SDMEEEEGPL EGGPGLQEPL QLGELDITSD BACU012228/1-723 MAAAATMAAA ARELVLRAGA SDMEEEEGPL EGGPGLQEPV QLGELDITSD 51 100 ENSBTAP00000003427/1-723 EFILDEVDVH IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR bmy_14325T0/1-720 EFILDEVDVH IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR ENSP00000409952/1-723 EFILDEVDVH IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR ENSTTRP00000004044/1-721 EFILDEVDVH IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR BACU012228/1-723 EFILDEVDVH IQANLEDELV KEALKTGVDL RHYSKQVELE LQQIEQKSIR 101 150 ENSBTAP00000003427/1-723 DYIQESENIA SLHNQITACD AVLERMEQML GAFQSDLSSI SSEIRTLQEQ bmy_14325T0/1-720 DYIQESENIA SLHNQITACD AVLERMEQML GAFQSDLSSI SSEIRTLQEQ ENSP00000409952/1-723 DYIQESENIA SLHNQITACD AVLERMEQML GAFQSDLSSI SSEIRTLQEQ ENSTTRP00000004044/1-721 DYIQESENIA SLHNQITACD AVLERMEQML GAFQSDLSSI SSEIRTLQEQ BACU012228/1-723 DYIQESENIA SLHNQITACD AVLERMEQML GAFQSDLSSI SSEIRTLQEQ 151 200 ENSBTAP00000003427/1-723 SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA LVTAILEAPV TEPRFLEQLQ bmy_14325T0/1-720 SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA LVTAILEAPV TEPRFLEQLQ ENSP00000409952/1-723 SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA LVTAILEAPV TEPRFLEQLQ ENSTTRP00000004044/1-721 SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA LVTAILEAPV TEPRFLEQLQ BACU012228/1-723 SGAMNIRLRN RQAVRGKLGE LVDGLVVPSA LVTAILEAPV TEPRFLEQLQ 201 250 ENSBTAP00000003427/1-723 ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RVKAVTKIRE FILQKIYSFR bmy_14325T0/1-720 ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RIKAVTKIRE FILQKIYSFR ENSP00000409952/1-723 ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RVKAVTKIRE FILQKIYSFR ENSTTRP00000004044/1-721 ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RIKAVTKIRE FILQKIYSFR BACU012228/1-723 ELDAKAAAVR EQEARGTAAC ADVRGVLDRL RIKAVTKIRE FILQKIYSFR 251 300 ENSBTAP00000003427/1-723 KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY bmy_14325T0/1-720 KPMTNYQIPQ TALLK--FFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY ENSP00000409952/1-723 KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY ENSTTRP00000004044/1-721 KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKMYLSYY BACU012228/1-723 KPMTNYQIPQ TALLKYRFFY QFLLGNERAT AKEIRDEYVE TLSKIYLSYY 301 350 ENSBTAP00000003427/1-723 RSYLGRLMKV Q--------- ---------- ------YEEV AEKDDLMGVE bmy_14325T0/1-720 RSYLGRLMKV QVRPRRERQS WAPWLGGGAA TGQWGTYEEV AEKDDLMG-- ENSP00000409952/1-723 RSYLGRLMKV Q--------- ---------- ------YEEV AEKDDLMGVE ENSTTRP00000004044/1-721 RSYLGRLMKV Q--------- ---------- ------YEEV AEKDDLMGVE BACU012228/1-723 RSYLGRLMKV Q--------- ---------- ------YEEV AEKDDLMGVE 351 400 ENSBTAP00000003427/1-723 DTAKKGFFSK PSLRSRNTIF TLGTRGSVIS PAELEAPILV PHTAQRGEQR bmy_14325T0/1-720 ---------- PSLRSRNTIF TLGTRGSVIS PTELEAPILV PHTAQRGEQR ENSP00000409952/1-723 DTAKKGFFSK PSLRSRNTIF TLGTRGSVIS PTELEAPILV PHTAQRGEQR ENSTTRP00000004044/1-721 DTAKKGFFSK PSLRSRNTIF TLGTRGSVIS PTELEAPILV PHTAQRGEQR BACU012228/1-723 DTAKKGFFSK PSLRSRNTIF TLGTRGSVIS PTELEAPILV PHTAQRGEQR 401 450 ENSBTAP00000003427/1-723 YPFEALFRSQ HYALLDNSCR EYLFICEFFM VSGPAAHDLF HAVMGRTLSM bmy_14325T0/1-720 YPFEALFRSQ HYALLDNSCR EYLFICEFFV VSGSAAQDLF HAVMGRTLSM ENSP00000409952/1-723 YPFEALFRSQ HYALLDNSCR EYLFICEFFV VSGPAAHDLF HAVMGRTLSM ENSTTRP00000004044/1-721 YPFEALFRSQ HYALLDNSCR EYLFICEFFV VSGSAAHDLF HAVMGRTLSM BACU012228/1-723 YPFEALFRSQ HYALLDNSCR EYLFICEFFV VSGSAAQDLF HAVMGRTLSM 451 500 ENSBTAP00000003427/1-723 TQKHLESYLV DCYDAIAVFL CIHIVLRFRN ITAKRDVPAL DRYWEQVLAL bmy_14325T0/1-720 TLKHLESYLT DCYDAIAVFL CIHIVLRFRN IAAKRDVPAL DRYWEQVLAL ENSP00000409952/1-723 TLKHLDSYLA DCYDAIAVFL CIHIVLRFRN IAAKRDVPAL DRYWEQVLAL ENSTTRP00000004044/1-721 TLKHLESYLT DCYDAIAVFL CIHIVLRFRN IAAKRDVPAL DRYWEQVLTL BACU012228/1-723 TLKHLESYLT DCYDAIAVFL CIHIVLRFRN IAAKRDVPAL DRYWEQVLAL 501 550 ENSBTAP00000003427/1-723 LWPRFELILE MNVQSVRSTD PQRLGGLDTR PHYITRRYAE FSSALVSINQ bmy_14325T0/1-720 LWPRFELILE MNVQSVRSTD PQRLGGLDTR PHYITRRYAE FSSALVSINQ ENSP00000409952/1-723 LWPRFELILE MNVQSVRSTD PQRLGGLDTR PHYITRRYAE FSSALVSINQ ENSTTRP00000004044/1-721 LWPRFELILE MNVQSVRSTD PQRLGGLDTR PHYITRRYAE FSSALVSINQ BACU012228/1-723 LWPRFELILE MNVQSVRSTD PQRLGGLDTR PHYITRRYAE FSSALVSINQ 551 600 ENSBTAP00000003427/1-723 TIPNERTMQL LGQLQVEVEN FVLRVAAEFS SRKEQLVFLI NNYDMMLGVL bmy_14325T0/1-720 TIPNERTMQL LGQLQVEVEN FVLRVAAEFS SRKEQLVFLI NNYDMMLG-- ENSP00000409952/1-723 TIPNERTMQL LGQLQVEVEN FVLRVAAEFS SRKEQLVFLI NNYDMMLGVL ENSTTRP00000004044/1-721 TIPNERTMQL LGQLQVEVEN FVLRVAAEFS SRKEQLVFLI NNYDMMLGVL BACU012228/1-723 TIPNERTMQL LGQLQVEVEN FVLRVAAEFS SRKEQLVFLI NNYDMMLGVL 601 650 ENSBTAP00000003427/1-723 MERAADDSKE VESFQQLLNA RTQEFIEELL SPPFGGLVAF VKEAEALIER bmy_14325T0/1-720 -------EGN PWRFPLLL-- ---EFIEELL SPPFGGLVAF VKEAEALIER ENSP00000409952/1-723 MERAADDSKE VESFQQLLNA RTQEFIEELL SPPFGGLVAF VKEAEALIER ENSTTRP00000004044/1-721 MERAADDSKE VESFQQLLNA RTQEFIEELL SPPFGGLVAF VKEAEALIER BACU012228/1-723 MERAADDSKE VESFQQLLNA RTQEFIEELL SPPFGGLVAF VKEAEALIER 651 700 ENSBTAP00000003427/1-723 GQAERLRGEE ARVTQLIRGF GSSWKSSVES LSQDVMRSFT NFRNGTSIIQ bmy_14325T0/1-720 GQAERLRGEE ARVTQLIRGF GSSWKSSVES LSQDVMRSFT NFKNGTSIIQ ENSP00000409952/1-723 GQAERLRGEE ARVTQLIRGF GSSWKSSVES LSQDVMRSFT NFRNGTSIIQ ENSTTRP00000004044/1-721 GQAERLRGEE ARVTQLIRGF GSSWKSSVES LSQDVMRSFT NF-NGTSIIQ BACU012228/1-723 GQAERLRGEE ARVTQLIRGF GSSWKSSVES LSQDVMRSFT NFKNGTSIIQ 701 750 ENSBTAP00000003427/1-723 GALTQLIQLY HRFHRVLSQP QLRALPARAE LINIHHLMVE LKKHKPNF bmy_14325T0/1-720 GALTQLIQLY HRFHRVLSQP QLRALPARAE LINIHHLMVE LKKHKPNF ENSP00000409952/1-723 GALTQLIQLY HRFHRVLSQP QLRALPARAE LINIHHLMVE LKKHKPNF ENSTTRP00000004044/1-721 GALTQLIQLY HRFHRVLSQP QLRALPARAE LINIHHLMVE LKKHKPNF BACU012228/1-723 GALTQLIQLY HRFHRVLSQP QLRALPARAE LINIHHLMVE LKKHKPNF