KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:59 2014 Check: 00 .. Name: ENSBTAP00000003131/1-232 Len: 315 Check: 3552 Weight: 1.00 Name: ENSP00000267970/1-253 Len: 315 Check: 116 Weight: 1.00 Name: bmy_01520T0/1-253 Len: 315 Check: 166 Weight: 1.00 Name: ENSTTRP00000015170/1-253 Len: 315 Check: 166 Weight: 1.00 Name: BACU017877/1-315 Len: 315 Check: 3303 Weight: 1.00 // 1 50 ENSBTAP00000003131/1-232 ---------- ---------- ---------- ---------- ---------- ENSP00000267970/1-253 MGQCGITSSK TVLVFLNLIF W--------- ---------- ---------- bmy_01520T0/1-253 MGQCGITSSK TVLVFLNLIF W--------- ---------- ---------- ENSTTRP00000015170/1-253 MGQCGITSSK TVLVFLNLIF W--------- ---------- ---------- BACU017877/1-315 MGQCGITSSK TVLVFLNLIF WNSLLDGELS LQILSGHQAR NRIFPKGSGS 51 100 ENSBTAP00000003131/1-232 ---------- ---------- ---------- ---GAAGILC YVGAYVFITY ENSP00000267970/1-253 ---------- ---------- ---------- ---GAAGILC YVGAYVFITY bmy_01520T0/1-253 ---------- ---------- ---------- ---GAAGILC YVGAYVFITY ENSTTRP00000015170/1-253 ---------- ---------- ---------- ---GAAGILC YVGAYVFITY BACU017877/1-315 AFFVGAWSPG SSSGSPEACE QMVQKCGDAT DSGGAAGILC YVGAYVFITY 101 150 ENSBTAP00000003131/1-232 DDYDHFFEDV YTLIPAVVII AVGALLFIIG LIGCCATIRE SRCGLATFVI ENSP00000267970/1-253 DDYDHFFEDV YTLIPAVVII AVGALLFIIG LIGCCATIRE SRCGLATFVI bmy_01520T0/1-253 DDYDHFFEDV YTLIPAVVII AVGALLFIIG LIGCCATIRE SRCGLATFVI ENSTTRP00000015170/1-253 DDYDHFFEDV YTLIPAVVII AVGALLFIIG LIGCCATIRE SRCGLATFVI BACU017877/1-315 DDYDHFFEDV YTLIPAVVII AVGALLFIIG LIGCCATIRE SRCGLATFVI 151 200 ENSBTAP00000003131/1-232 ILLLVFVTEV VVVVLGYVYR AKVENEVDRS IQKVYKTYNG TNPDAASRAI ENSP00000267970/1-253 ILLLVFVTEV VVVVLGYVYR AKVENEVDRS IQKVYKTYNG TNPDAASRAI bmy_01520T0/1-253 ILLLVFVTEV VVVVLGYVYR AKVENEVDRS IQKVYKTYNG TNPDAASRAI ENSTTRP00000015170/1-253 ILLLVFVTEV VVVVLGYVYR AKVENEVDRS IQKVYKTYNG TNPDAASRAI BACU017877/1-315 ILLLVFVTEV VVVVLGYVYR AKVENEVDRS IQKVYKTYNG TNPDAASRAI 201 250 ENSBTAP00000003131/1-232 DYVQRQLHCC GIHNYSDWEN TDWFKETKNQ SVPLSCCRET ASSCNGSLAN ENSP00000267970/1-253 DYVQRQLHCC GIHNYSDWEN TDWFKETKNQ SVPLSCCRET ASNCNGSLAH bmy_01520T0/1-253 DYVQRQLHCC GIHNYSDWEN TDWFKETKNQ SVPLSCCRET ASSCNGSLAH ENSTTRP00000015170/1-253 DYVQRQLHCC GIHNYSDWEN TDWFKETKNQ SVPLSCCRET ASSCNGSLAH BACU017877/1-315 DYVQRQLHCC GIHNYSDWEN TDWFKETKNQ SVPLSCCRET ASSCNGSLAH 251 300 ENSBTAP00000003131/1-232 PSDLYAEGCE ALVVKKLQEI MMHVIWAALA FAAIQLLGML CACIVLCRRS ENSP00000267970/1-253 PSDLYAEGCE ALVVKKLQEI MMHVIWAALA FAAIQLLGML CACIVLCRRS bmy_01520T0/1-253 PSDLYAEGCE ALVVKKLQEI MMHVIWAALA FAAIQLLGML CACIVLCRRS ENSTTRP00000015170/1-253 PSDLYAEGCE ALVVKKLQEI MMHVIWAALA FAAIQLLGML CACIVLCRRS BACU017877/1-315 PSDLYAEGCE ALVVKKLQEI MMHVIWAALA FAAIQLLGML CACIVLCRRS 301 350 ENSBTAP00000003131/1-232 RDPAYELLIT GGAYA ENSP00000267970/1-253 RDPAYELLIT GGTYA bmy_01520T0/1-253 RDPAYELLIT GGTYA ENSTTRP00000015170/1-253 RDPAYELLIT GGTYA BACU017877/1-315 RDPAYELLIT GGTYA