KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:29 2014 Check: 00 .. Name: ENSP00000352941/1-426 Len: 427 Check: 5929 Weight: 1.00 Name: ENSBTAP00000002929/1-422 Len: 427 Check: 9181 Weight: 1.00 Name: ENSTTRP00000009556/1-423 Len: 427 Check: 7800 Weight: 1.00 Name: bmy_13951T0/1-268 Len: 427 Check: 9391 Weight: 1.00 Name: BACU014120/1-423 Len: 427 Check: 7545 Weight: 1.00 // 1 50 ENSP00000352941/1-426 MEGHKAEEEV LDVLRLNVGG CIYTARRESL CRFKDSMLAS MFSGRFPLKT ENSBTAP00000002929/1-422 MEGHKAEEEV LDILRLNVGG CIYTARRESL CRFKDSMLAS MFSGRFPLKT ENSTTRP00000009556/1-423 MEGHKAEEEV LDILRLNVGG CIYTARRQSL CRFKDSMLAS MFSGRFPLKT bmy_13951T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU014120/1-423 MEGHKAEEEV LDILRLNVGG CIYAARRESL CRFKDSMLAS MFSGRFPLKT 51 100 ENSP00000352941/1-426 DESGACVIDR DGRLFKYLLD YLHGEVQIPT DEQTRIALQE EADYFGIPYP ENSBTAP00000002929/1-422 DESGACVIDR DGHLFKYLLD YLHGEVHIPT EEQTRVALQE EADYFGIPYP ENSTTRP00000009556/1-423 DESGACVIDR DGHLFKYLLD YLHGEVHIPT EEQTRIALQE EADYFGIPYP bmy_13951T0/1-268 ---------- ---------- ---------- ---------- ---------- BACU014120/1-423 DESGACVIDR DGHLFKYLLD YLHGEVHIPT EEQTLIALQE EADYFGIPYP 101 150 ENSP00000352941/1-426 YSLSDHLANE METYSLRSNI ELKKALTDFC DSYGLVCNKP TVWVLHYLNT ENSBTAP00000002929/1-422 YSLSDHLANE METYSLRSNI ELKKALTDFC DSYGLVCNKP TVWVLHYLNT ENSTTRP00000009556/1-423 YSLSDHLANE METYSLRSNI ELKKALTDFC DSYGLVCNKP TVWVLHYLNT bmy_13951T0/1-268 ---------- ---------- ----ALTDFC DSYGLVCNKP TVWVLHYLNT BACU014120/1-423 YSLSDHLANE METYSLRSNI ELKKALTDFC DSYGLVCNKP TVWVLHYLNT 151 200 ENSP00000352941/1-426 SGASCESRII GVYATKTDGT DAIEKQLGGR IHSKGIFKRE AGNNVQYIWS ENSBTAP00000002929/1-422 SGASCESRII GVYSTKTDGT DAIDKQLGGR IHSKSIFKRE AGNNVQYIWS ENSTTRP00000009556/1-423 SGASCESRII GVYSTKTDGT DAIDKQLGGR IHSKCVFKRE AGNNVQYIWS bmy_13951T0/1-268 SGASCESRII GVYSTKTDGT DAIDKQLGGR IHSKSIFKRE AGNNVQYIWS BACU014120/1-423 SGASCESRII GVYSTKTDGT DAIDKQLGGR IHSKSIFKRE AGNNVQYIWS 201 250 ENSP00000352941/1-426 YYSVAELKKM MDAFDAWEGK GVSYWRVPHE LIECWTLEER PLLGSLRHMA ENSBTAP00000002929/1-422 DYSVAELKKM MDAFDAWEGK GVSYWRVPHE LIECWTLEER PLLGSLSHMA ENSTTRP00000009556/1-423 YYSVAELKEM MDAFDAWEGK GVSYWRVPHE LIECWTLEER PLHGSLRHMA bmy_13951T0/1-268 YYSVAELKKM MDAFDAWEGK ---------- --------ER PLHGSLRHMA BACU014120/1-423 YYSVAELKKM MDAFDAWEGK GVSYWRVPHE LIECWTLEAR PLHGSLRHMA 251 300 ENSP00000352941/1-426 PIRKRRLITF N-EADESVNY KTGPKPVRFL GPSTSTQIKV KNSASVTVSP ENSBTAP00000002929/1-422 PIRKRRLIV- NEEEEEGVNC KTGPKPVRFL GPSTSTQIKV KNSASIRVSP ENSTTRP00000009556/1-423 PIRKRRLIAP NEEEEGGVNC KTGPKPVRFL GPSTSTQIKV KNSASVRVPP bmy_13951T0/1-268 PIRKRRLIAP NEEEEEGVNC KTGPKPVRFL GPSTSTQIKV KNSASVRVPP BACU014120/1-423 PIRKRRLIAP NEEEDEGVNC KTGPKPVRFL GPSTSTQIKV KNSASVRVPP 301 350 ENSP00000352941/1-426 ASAIQTSAGA TANRFQSGSR RKAAQRSAPS RATALVGTGA PGHPQASPGA ENSBTAP00000002929/1-422 ASAPQPWPRA TANLAAGG-- -RAVQRSAQS KVPTPVGTGL PEHPQAAQGP ENSTTRP00000009556/1-423 ASVPQPWSRA SVNPAAGG-- -RAAQRSAPL KAPSPVGTGL PGHPQAAHET bmy_13951T0/1-268 ASAPQPWSQA SVNPAAGG-- -RAAQRSAPW KAPSPVGTGL PGHPQAAHGT BACU014120/1-423 ASAPQPWSRA SVNPAAGG-- -RAAQRSAPS KAPSPVGTGL PGHPQAAHGT 351 400 ENSP00000352941/1-426 ASAENGGTHL PPAKVLLSDK KPTPQRVIKL KRTPLCATAP CLPSPTATRQ ENSBTAP00000002929/1-422 GAPENGATHL PPAKVLLSDK TATPHRVIKL RRTPLCATGS SLPACTTPRP ENSTTRP00000009556/1-423 GGAENGAMHP PPAKVLLCDK KATPHRVIKL KRTPLCATGP STPACTVARP bmy_13951T0/1-268 GGAENGATHP PPAKVLLSDK KATPHRVIKL KRTPLCAAGP SPPACXAARP BACU014120/1-423 GGAENGATHP PPAKVLLSDK KATPHRVIKL KRTPLCAAGP SPPACPAVRP 401 450 ENSP00000352941/1-426 ANSLKPLPGE AARALGVRTE NGKNKGN ENSBTAP00000002929/1-422 AGPPEPPP-D ALSPLGTWTE NGQDQTK ENSTTRP00000009556/1-423 AGPTEPNP-D AASALGTRTE NGQGQAD bmy_13951T0/1-268 EGSPEPTP-D APA------- ------D BACU014120/1-423 EVSPEPTP-D APSALGARTE NGQGQTD