KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:22 2014 Check: 00 .. Name: ENSP00000465213/1-220 Len: 249 Check: 5828 Weight: 1.00 Name: bmy_03031T0/1-248 Len: 249 Check: 3315 Weight: 1.00 Name: ENSBTAP00000002876/1-182 Len: 249 Check: 6802 Weight: 1.00 Name: BACU000548/1-221 Len: 249 Check: 4729 Weight: 1.00 Name: ENSTTRP00000005556/1-220 Len: 249 Check: 5165 Weight: 1.00 // 1 50 ENSP00000465213/1-220 -MKSVIYHAL SQKEANDSDV QPSGAQRAEA FVRAFLKRST PRMSPQARED bmy_03031T0/1-248 -MNSVIYHAF SQKEAKEFDI QHPGTQRAEA FVRAFLKRSM PRMSQQAQED ENSBTAP00000002876/1-182 ---------- ---------- ---------- ---------M PRMSQQALED BACU000548/1-221 MRHRVIYHAF SQKEAKEFDI QHPGTQRAEA FVRAFLKRSM PHMSQQAQED ENSTTRP00000005556/1-220 -MNSVIYHAL SQKDAKEFDI QHPGTQRAEA FVRAFLKRSM PRMSRQAQED 51 100 ENSP00000465213/1-220 QLQRKAVVLE YFTRHKRKEK KKKAKGLSAR QRRELRLFDI KPEQQRYSLF bmy_03031T0/1-248 HLQRKAVVLE YFTHRKQKEK KKKSKGLSAK QRRELRLFDI NPEQQRYSLF ENSBTAP00000002876/1-182 HLQRKAVVLE YFTHRKQKEK RKKSKGLSAK QRRELRLFDI KPEQQRYSLF BACU000548/1-221 HLQRKAVVLE YFTHRKQKEK KKKSKGLSAK QRRELRLFDI NPEQQRYSLF ENSTTRP00000005556/1-220 HLQRKAVVLE YFTHRKQKEK KKKSKGLSAK QRRELRLFDI NPEQQRYSLF 101 150 ENSP00000465213/1-220 LPLHELWKQY IRDLCSGLKP DTQPQMIQAK LLKADLHGAI ISVTKSKCPS bmy_03031T0/1-248 LPLHELWKQY IRDLCNGLKP DMQPQMIQAK LLKADLHGAI VSVTKSKCPS ENSBTAP00000002876/1-182 LPLHELWKQY IRDLCNGLKP DTQPQMIQAK LLKADLHGAI VSVTKSKCPS BACU000548/1-221 LPLHELWKQY IRDLCSGLKP DMQPQMIQAK LLKADLHGAI VSVTKSKCPS ENSTTRP00000005556/1-220 LPLHELWKQY IRDLCNGLKP DMQPQMIQAK LLKADLHGAI VSVTKSKCPS 151 200 ENSP00000465213/1-220 YVGITGILLQ ETKHIFKIIT KEDRLKVIPK LNCVFTVETD GFISYIYGSK bmy_03031T0/1-248 YVGITGILLQ ETKHIFKIIT KEDRLKVIPK LNCVFTVEID GFISYIYGSK ENSBTAP00000002876/1-182 YVGVTGILLQ ETKHVFKIIT KEDRLKVIPK LNCVFTVEID GFISYIYGSK BACU000548/1-221 YVGITGILLQ ETKHIFKIIT KEDRLKVIPK LNCVFTVEID GFISYIYGSK ENSTTRP00000005556/1-220 YVGITGILLQ ETKHIFKIIT KEDRLKVIPK LNCVFTVEID GFISYIYGSK 201 250 ENSP00000465213/1-220 FQLRSSERSA KK------FK AKGTIDL--- ---------- --------- bmy_03031T0/1-248 FQLRSKKQQC QRLHCVSILR SDSTLDEKHH SGGESVNTDF TLLEESKKT ENSBTAP00000002876/1-182 FQLRSSERSA KK------FK AKGTIDL--- ---------- --------- BACU000548/1-221 FQLRSSERSA KK------FK AKGTIDL--- ---------- --------- ENSTTRP00000005556/1-220 FQLRSSERSA KK------FK AKGTIDL--- ---------- ---------