KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:19:02 2014 Check: 00 .. Name: ENSP00000245457/1-358 Len: 559 Check: 432 Weight: 1.00 Name: ENSBTAP00000002800/1-352 Len: 559 Check: 9435 Weight: 1.00 Name: bmy_09906T0/1-559 Len: 559 Check: 5071 Weight: 1.00 Name: BACU015342/1-354 Len: 559 Check: 7601 Weight: 1.00 Name: ENSTTRP00000010084/1-357 Len: 559 Check: 934 Weight: 1.00 // 1 50 ENSP00000245457/1-358 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002800/1-352 ---------- ---------- ---------- ---------- ---------- bmy_09906T0/1-559 MLEQAACRLN PSRRRSGSLR ASSKPSGERG PLLPPPTLAP RPARTPPPRS BACU015342/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010084/1-357 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000245457/1-358 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002800/1-352 ---------- ---------- ---------- ---------- ---------- bmy_09906T0/1-559 RRDLQCDAPT SRRLAGSRSG VAATPGRRGR DGGGGGSLGA GRRRSVERRM BACU015342/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010084/1-357 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000245457/1-358 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002800/1-352 ---------- ---------- ---------- ---------- ---------- bmy_09906T0/1-559 DCGSRAASPR ALGDPGRARH LCALGAGRGL WISVPPLSLG VSERSGSQTL BACU015342/1-354 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010084/1-357 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000245457/1-358 ---------- ---------- MGNASNDSQS EDCETRQWLP PGESPAISSV ENSBTAP00000002800/1-352 ---------- ---------- MGNTSNDSQS ENREEPLWLP SGESPAISSV bmy_09906T0/1-559 LQPGAGRRER RTHLFFRRPT MGNTSNDSRP ENCDTRQWLP SGESPAISSV BACU015342/1-354 ---------- ---------- MGNTSNDSRP ENCDTRQWLP SGESPALSSV ENSTTRP00000010084/1-357 ---------- ---------- MGNTSNDSWP ENCDTRQWLP SGESPAISSV 201 250 ENSP00000245457/1-358 MFSAGVLGNL IALALLARRW RGDVGCSAGR RSSLSLFHVL VTELVFTDLL ENSBTAP00000002800/1-352 MFTAGVLGNL IALALLVRRW RGDSGRSEGR GNSISLFHVL VTELVLTDLL bmy_09906T0/1-559 MFSAGVLGNL IALALLVRRW LGDSGRSAGR GNSISLFHVL VTELVFTDLL BACU015342/1-354 MFSAGVLGNL IALALLVRRW LGDSGRSAGR GNSISLFHVL VTELVFTDLL ENSTTRP00000010084/1-357 MFSAGVLGNL IALALLVRRW LGDSGRSAGR GNSISLFHVL VTELVFTDLL 251 300 ENSP00000245457/1-358 GTCLISPVVL ASYARNQTLV ALAPESRACT YFAFAMTFFS LATMLMLFAM ENSBTAP00000002800/1-352 GTCLISPVVL ASYAQNRTLV ALGPERRVCT YFAFSMTFFS LATMLMLFAM bmy_09906T0/1-559 GTCLISPVVL ASYARNQTLV ALEPQRRVCT YFAFAMTFFS LATMLMLFAM BACU015342/1-354 GTCLISPVVL ASYARNQTLV ALEPQRRVCT YFAFAMTFFS LATMLMLFAM ENSTTRP00000010084/1-357 GTCLISPVVL ASYARNQTLV ALEPQRRVCT YFAFSMTFFS LATMLMLFAM 301 350 ENSP00000245457/1-358 ALERYLSIGH PYFYQRRVSR SGGLAVLPVI YAVSLLFCSL PLLDYGQYVQ ENSBTAP00000002800/1-352 ALERYLAIGH PYFYQRRVTR RSGLAVLPTI YIVSLLFCSL PLLDHWKYAQ bmy_09906T0/1-559 ALERYLAIGH PYFYQRWVTC RGGLAVLPAI YTVSLLFCSL PLLDHRQYAQ BACU015342/1-354 ALERYLAIGH PYFYQRWVTC RGGLAVLPAI YTVSLLFCSL PLLDHRQYAQ ENSTTRP00000010084/1-357 ALERYLAIGH PYFYQRWVTC RGGLAVLPAI YTVSLLFCSL PLLDHRQYAQ 351 400 ENSP00000245457/1-358 YCPGTWCFIR HGRTAYLQLY ATLLLLLIVS VLACNFSVIL NLIRMHRRSR ENSBTAP00000002800/1-352 YNPGTWCFIG HKQTTYLRLY ATLLLLLIIA VLACNFSVIV NLIHMHRRGR bmy_09906T0/1-559 YCPGTWCFIG HEQTTYLRLY ATLLLLLIIA VLACNFSVIL SLIHMHRRGR BACU015342/1-354 YCPGTWCFIG HEQTTYLRLY ATLLLLLIIA VLACNFSVIL NLIHMHRRGR ENSTTRP00000010084/1-357 YCPGTWCFIG HEQTTYLRLY ATLLLLLIIA VLACNFSVIL NLIHMHRRGR 401 450 ENSP00000245457/1-358 RSRCGPSLGS GRGGPGARRR GERVSMAEET DHLILLAIMT ITFAVCSLPF ENSBTAP00000002800/1-352 RSRCGPSLGS ------SHRR AERVSMAEET DHLILLAIMT ITFAVCSLPF bmy_09906T0/1-559 RSRSGPSLGS SRGGPGSHXK GERVSMAEET DHLILLAIMT ITFAVCSLPF BACU015342/1-354 RSRSGPSLGS SRGGPGSHRK GERVSMAEET DHLILLAIMT ITFAVCSLPF ENSTTRP00000010084/1-357 RSRSGPSLGS SRGGPGSHRK GERVSMAEET DHLILLAIMT ITFAVCSLPF 451 500 ENSP00000245457/1-358 TIFAYMNETS SRKEKWDLQA LRFLSINSII DPWVFAILRP PVLRLMRSVL ENSBTAP00000002800/1-352 TIFAYMNENS SRKEKWDLQA LRFLSINSII DPWVFAILRP PVLRLMRSVL bmy_09906T0/1-559 TIFAYMNETS SRKEKWDLQA LRFLSINSII DPWVFAILRP PVLRLMRSVL BACU015342/1-354 TIFAYMNETS SRKEKWDLQA LRFLSINSII DPWVFAILRP PVLRLIRSVL ENSTTRP00000010084/1-357 TIFAYMNETS SRKEKWDLQA LRFLSINSII DPWVFAILRP PVLRLMRSVL 501 550 ENSP00000245457/1-358 CCRISLRTQD ATQTSCSTQS DA-------- SKQADL---- ---------- ENSBTAP00000002800/1-352 CCRVSLRTQE ATQTSCSTQS NA-------- SKQIDL---- ---------- bmy_09906T0/1-559 CCRVSLRTQD ATQTSCSTPS NAISGMKREK ETMVDIQLRI PALTLGVQKW BACU015342/1-354 CCRVSLRTQD ATQTSCSTQS NA-------- TK-------- ---------- ENSTTRP00000010084/1-357 CCRVSLRTQD ATQTSCSAQS NA-------- -HKVDL---- ---------- 551 600 ENSP00000245457/1-358 --------- ENSBTAP00000002800/1-352 --------- bmy_09906T0/1-559 DGPKQSILS BACU015342/1-354 --------- ENSTTRP00000010084/1-357 ---------