KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:36 2014 Check: 00 .. Name: ENSP00000290208/1-271 Len: 272 Check: 2290 Weight: 1.00 Name: ENSBTAP00000002395/1-262 Len: 272 Check: 2317 Weight: 1.00 Name: bmy_14049T0/1-138 Len: 272 Check: 9824 Weight: 1.00 Name: BACU006983/1-262 Len: 272 Check: 5363 Weight: 1.00 Name: ENSTTRP00000011808/1-244 Len: 272 Check: 32 Weight: 1.00 // 1 50 ENSP00000290208/1-271 MISAHCNLHL PGSSDSPASA SQVAGITGRL PTLQTVRYGS KAVTRHRRVM ENSBTAP00000002395/1-262 MAAAVAGMLR GG-------- --LLPQAGRL PTHQFIRYGS KAVTRHRRVM bmy_14049T0/1-138 ---------- ---------- ---------- ---------- ---------M BACU006983/1-262 MAAAVAWMLR RG-------- --LLPQAGQL PTRQLVRYGS KAVTRHRRVM ENSTTRP00000011808/1-244 ---------- ---------- --------QL PIRQLVRYGS KAVTRHRRVM 51 100 ENSP00000290208/1-271 HFQRQKLMAV TEYIPPKPAI HPSCLPSPPS PPQEEIGLIR LLRREIAAVF ENSBTAP00000002395/1-262 HFERQKLMAV TEYIAPKPVV NPRCLPPPPS PPQEETGLIR LLRREIAAVF bmy_14049T0/1-138 HFERQKLMAV TEYIPPKPAV NPRCLPPPPR PPQEETGLVR LLRREIVAVF BACU006983/1-262 HFERQKLMAV TEYIPPKPAV NPRCLPPPPR PPQEETGLIR LLRQEIAAVF ENSTTRP00000011808/1-244 HFERQKLMAV TEYIPPKPAV NPRCLPPPPR PPQEETGLVR LLRREIAAVF 101 150 ENSP00000290208/1-271 QDNRMIAVCQ NVALSAEDKL LMRHQLRKHK ILMKVFPNQV LKPFLEDSKY ENSBTAP00000002395/1-262 RDNRMIAVCQ NVAMSAEDKL LMRHQLRKHK ILMKVFPNQI LKPFLEDSKY bmy_14049T0/1-138 RDNRMIAVCQ NVALSAEDKL LVRHRLRKHK ILMKVFPNQI LKSFLEGSKY BACU006983/1-262 RDNRMIAVCQ NVALSAEDKL LMRHRLRKHK ILMKVFPNQI LKSFLEDSKY ENSTTRP00000011808/1-244 RDNRMIAVCQ NVALSAEDKL LMRHRLRRHK ILMKVFPNQI LKSFLEDSKY 151 200 ENSP00000290208/1-271 QNLLPLFVGH NMLLVSEEPK VKEMVRILRT VPFLPLLGGC IDDTILSRQG ENSBTAP00000002395/1-262 QNLLPLFVGH NLLLVSEEPK VKEMVRILKS VPFLPLLGGC IDDTILSRQG bmy_14049T0/1-138 QNLLPLFVGH NLLLVSEEPK VKEMVRILKS VPFLPLL--- ---------- BACU006983/1-262 QNLLPLFVGH NLLLVSEEPK VKEMVRILKS VPFLPLLGGC IDDTILSRQG ENSTTRP00000011808/1-244 PNLLPLFVGH NLLLVSEEPK VKEMVRILKS VPFLPLLGGC VDDIILSRQG 201 250 ENSP00000290208/1-271 FINYSKLPSL PLVQGELVGG LTCLTAQTHS LLQHQPLQLT TLLDQYIREQ ENSBTAP00000002395/1-262 FINYSKLPSL ALAQGELVGG LTLLTARTHS LLQHHPLQLT ALLDQYARQQ bmy_14049T0/1-138 ---------- ---------- ---------- ---------- ---------- BACU006983/1-262 FVNYSKLPSL ALVQGELVGG LTLLTAQTHS LLQHQPLQLT ALLDQYVRQQ ENSTTRP00000011808/1-244 FINYSKLPSL ALVQGELVGG LTLLTAQTHS LLQHQPLRLT ALLDQYVRQQ 251 300 ENSP00000290208/1-271 REKDSVMSAN GKPD-PDTVP DS ENSBTAP00000002395/1-262 HEGDPVVPAS AQPDPPNPVQ DS bmy_14049T0/1-138 ---------- ---------- -- BACU006983/1-262 HEEDPVVPAS GQPDPPDPVP DS ENSTTRP00000011808/1-244 HEEDPVVPAS GQPDPPDAVP DS