KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:35 2014 Check: 00 .. Name: ENSP00000269025/1-321 Len: 339 Check: 2879 Weight: 1.00 Name: ENSBTAP00000002392/1-324 Len: 339 Check: 142 Weight: 1.00 Name: ENSTTRP00000011821/1-323 Len: 339 Check: 7077 Weight: 1.00 Name: bmy_14050T0/1-338 Len: 339 Check: 6519 Weight: 1.00 Name: BACU006982/1-311 Len: 339 Check: 7602 Weight: 1.00 // 1 50 ENSP00000269025/1-321 ---MS----- -------GGK SAQGPEEG-G VCITEALITK RNLTFPEDGE ENSBTAP00000002392/1-324 ---MP----- -------GAK LAQSPEEISG VCITEALITR RNLAFPEDED ENSTTRP00000011821/1-323 ---MP----- -------GDK PAQSPEEG-G VCITEALITK RNLAFPEDED bmy_14050T0/1-338 RVRPPRIRKC NNWTLLFTAK PAQSPEEG-G VCITEALITK RNLAFPEDED BACU006982/1-311 ---MP----- -------GAK PAQSPEEG-G VCITEALITK RNLAFPEDED 51 100 ENSP00000269025/1-321 LSEKMFHTLD ELQTVRLDRE GITTIRNLEG LQNLHSLYLQ GNKIQQIENL ENSBTAP00000002392/1-324 LSEKMFHTLA ELQTVRLDRE GITTIRNLEG LQNLHSLYLQ GNKIQRIENL ENSTTRP00000011821/1-323 LSEKMFHTLA ELQTVRLDRE GITTIRNLEG FQNLHSLYLQ GNKIERIENL bmy_14050T0/1-338 LSEKMFHTLA ELQTVRLDRE GITTIRNLEG LQNLHSLYLQ GNKIERIENL BACU006982/1-311 LSEKMFHTLA ELQTVRLDRE GITTIRNLEG LQNLHSLYLQ GNKIERIENL 101 150 ENSP00000269025/1-321 ACIPSLRFLS LAGNQIRQVE NLLDLPCLQF LDLSENLIET LKLDEFPQSL ENSBTAP00000002392/1-324 ACVPSLRFLS LAGNQIRQVE NLRDLPHLQF LDLSENLIET LKLDEFPESL ENSTTRP00000011821/1-323 ACVPSLRFLS LAGNRIRQVE NLRDLPHLQF LDLSENLIEI LKLDEFPESL bmy_14050T0/1-338 ACVPSLRFLS LAGNRIRQVE NLRDLPHLQF LDLSENLIEI LKLDEFPESL BACU006982/1-311 ACVPSLRFLS LAGNRIRQVE NLRDLPHLQF LDLSENLIEI LKLDEFPESL 151 200 ENSP00000269025/1-321 LILNLSGNSC TNQDGYRELV TEALPLLLDL DGQPVVERWI SDEEDEASS- ENSBTAP00000002392/1-324 LILNLTGNSC TNQDGYRKLL TEALPLLLDL DGQPVAERWT SDEEDTALSD ENSTTRP00000011821/1-323 LILNLTGNSC TNQESYRRLV TEALPLLLDL DGQPVAERWT SDEEDQASSN bmy_14050T0/1-338 LILNLTGNSC TNQDGYRKLV TEALPLLLDL DRQPVAERWT SDEEDKASSD BACU006982/1-311 LILNLTGNSC TNQDGYRKLV TEALPLLLDL DRQPVAERWT SDEEDKASSD 201 250 ENSP00000269025/1-321 -DEEFPELSG PFCSERGFLK ELEQELSRHR EHRQQTALTE HLLRMEMQPT ENSBTAP00000002392/1-324 EDEEFPELRG PFCSERGFLK ELEQGMSRHR ELRQQTALLE HQLRVETQPT ENSTTRP00000011821/1-323 EDEEFPELRG PFCSERGFLK ELEQETSRHR EHRQQTALLE HLLRVEMRPT bmy_14050T0/1-338 EDEEFPELKG PFCSERGFLK ELGQEMSRHR EHRQRTALLE HLLRVEMRPA BACU006982/1-311 EDEEFPELRG PFCSERGFLK ELGQEMSRHR EHRQRTALLE HLLRVEMRPA 251 300 ENSP00000269025/1-321 LTDLPLLPGV PMAGDSSPSA TPAQGEETVP EAVSSPQASS PTKKPCSLIP ENSBTAP00000002392/1-324 LTDLPPLPGA PMAGDSSPSV TPTQEKETTP EPASLPEASS TTKRLCPLAP ENSTTRP00000011821/1-323 LTDLPLLPGA PMAGNSSPSV TPRQGKETSP EPVSLPQASS ATKKPCLPAS bmy_14050T0/1-338 LTDPPLLPGA PMAGDRSPSV TPRQGKETSL EPVSLPQASS ATKKPCLLAS BACU006982/1-311 LTDPPLLPGA PMAGDRSPSV TPRQGKETSP EPVSLPQASS ATKKPCLLPS 301 350 ENSP00000269025/1-321 RGHQSSFWGR KGARAATAPK ASVAEAPSTT KTTAKRSKK ENSBTAP00000002392/1-324 RGQQSTMQAR KGARAATAPK ASLAGAPSTT KTVTKKIKK ENSTTRP00000011821/1-323 RSQQSTVQAG KGARAAAAAK ASPAGAPSTT KTVTEKIKK bmy_14050T0/1-338 RSQQSTVQAG KGVRVAAAAK ASPAGAPSTT KTVTKRIKK BACU006982/1-311 RSQESTVQAG KGVKSGRSRQ GLSGWGP--- ---------