KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:06 2014 Check: 00 .. Name: ENSP00000354525/1-216 Len: 225 Check: 6528 Weight: 1.00 Name: ENSBTAP00000001991/1-216 Len: 225 Check: 5355 Weight: 1.00 Name: bmy_03428T0/1-225 Len: 225 Check: 9584 Weight: 1.00 Name: BACU003927/1-225 Len: 225 Check: 9623 Weight: 1.00 Name: ENSTTRP00000013758/1-216 Len: 225 Check: 5597 Weight: 1.00 // 1 50 ENSP00000354525/1-216 MRLSALLALA SKVTLPPHYR YGMSPPGSVA DKRKNPPWIR RRPVVVEPIS ENSBTAP00000001991/1-216 MRLSALLALA SKVTLPPNYR YGMSRPGSLA DKKKNPPGTR RRRVAVEPIP bmy_03428T0/1-225 MRLSALLALA SKVTLPPNYR YGMSRPGSLS DKKKNPPGTR RRRVAVEPIS BACU003927/1-225 MRLSALLALA SKVTLPPNYR YGMSRPGSLS DKKKNPPGTR RRRVAVEPIS ENSTTRP00000013758/1-216 MRLSALLALA SKVTLPPNYR YGMSRPGSLS DKKKNPPGTR RRRVAVEPIS 51 100 ENSP00000354525/1-216 DEDWYLFCGD TVEILEGKDA GKQGKVVQVI RQRNWVVVGG LNTHYRYIGK ENSBTAP00000001991/1-216 EEDWHLFCGD RVEILEGKDA GKQGKVVQVI RQRNWVVVEG LNTHYRYVGK bmy_03428T0/1-225 DEDWHLFYGD RVEILEGKDA GKQGKVVQVI RQRNWVVVEG LNTHYRYIGK BACU003927/1-225 DEDWHLFYGD RVEILEGKDA GKQGKVVQVI RQRNWVVVEG LNTHYRYIGK ENSTTRP00000013758/1-216 DEDWHLFCGD RVEILEGKDA GKQGKVVQVI RQRNWVVVEG LNTHYRYVGK 101 150 ENSP00000354525/1-216 TMDYRGTMIP SEAPLLHRQV KLVDPMDR-- -------KPT EIEWRFTEAG ENSBTAP00000001991/1-216 TVDFRGTMVP SEAPLLHNQV KLVDPMDR-- -------KPT EVEWRFTEAG bmy_03428T0/1-225 TVDYRGTMIP SEAPLLHNQV KLVDPVDRQA HGALVRGKPT EVEWRFTEAG BACU003927/1-225 TVDYRGTMIP SEAPLLHNQV KLVDPVDRQA HGALVRGKPT EVEWRFTEAG ENSTTRP00000013758/1-216 TVDYRGTMIP SEAPLLHNQV KLVDPVDR-- -------KPT EVEWRFTEAG 151 200 ENSP00000354525/1-216 ERVRVSTRSG RIIPKPEFPR ADGIVPETWI DGPKDTSVED ALERTYVPCL ENSBTAP00000001991/1-216 ERVRVSTRSG RIIPKPDVPR ADGIVPETWI DGPKDTSVED ALEKTYVPRL bmy_03428T0/1-225 ERVRVSTRSG RIIPKPEFPR ADGIVPETWI DGPKDTSVED ALEKTYVPSL BACU003927/1-225 ERVRVSTRSG RIIPKPEFPR ADGVVPETWI DGPKDTSVED ALEKTYVPSL ENSTTRP00000013758/1-216 ERVRVSRRSG RIIPKPEFPR ADGIVPETWI GGPKDTSVED ALEKTYVPSL 201 250 ENSP00000354525/1-216 KTLQEEVMEA MGIKETRKYK KVYWY ENSBTAP00000001991/1-216 KTLEEEVMEA MGIQETRRHK KVYWY bmy_03428T0/1-225 KTLEEEVMEA MGIQETRRHK KVYWY BACU003927/1-225 KTLEEEVMEA MGIQETRRHK KVYWY ENSTTRP00000013758/1-216 KTLEEEVMEA MGIQETRRHK KVYWY