KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:15:42 2014 Check: 00 .. Name: ENSTTRP00000001428/1-264 Len: 283 Check: 4264 Weight: 1.00 Name: ENSBTAP00000001898/1-263 Len: 283 Check: 1763 Weight: 1.00 Name: bmy_13579T0/1-275 Len: 283 Check: 8578 Weight: 1.00 Name: BACU005837/1-221 Len: 283 Check: 5102 Weight: 1.00 // 1 50 ENSTTRP00000001428/1-264 ---------- ---------M ESGFTSKDTY LSHFNPQAYL EKYYSFGSRH ENSBTAP00000001898/1-263 ---------- ---------M EGELYKGEDY KTEFQPQNYL KTYYAFDSGT bmy_13579T0/1-275 MASAAACSPR PRGSSLIWSV STGPLAGEDY KKEFDSQDYL NTYYTFNSGT BACU005837/1-221 ---------- ---------M EGKLYTGEDY KKEFDSQDYL KTYYTFDSGT 51 100 ENSTTRP00000001428/1-264 SAEKQILRHL LKNLFKIFCL DGVKGDLLID IGSGPTIYQL LSACESFKEI ENSBTAP00000001898/1-263 IAENEVLKFN LNNLFETFSP GGMGGDILID IGSGPTIYQL LSACEVFREI bmy_13579T0/1-275 VAENEILKFN LKNLFETFSS AGVRGDVLIN TGPGPTIYQL LSACEAFREI BACU005837/1-221 VAEHEILKFN LKNLFETFSS AGVRGDVLIN TGPGPTIYQL LSACEAFREI 101 150 ENSTTRP00000001428/1-264 IATDYTDQNL RELEKWLKKE PGAFDWSPVV AYVCELEGNR VKGPEKEEKL ENSBTAP00000001898/1-263 IMSDYTELNL REVDKWLKKE LGAYDWSPAV QYVCELEGDR SKWQEKEARV bmy_13579T0/1-275 TASDCSEQNP REVKKWLKKE PGAYDWSPAM QYVS--SGRR RRPVSEGQR- BACU005837/1-221 IASDYSEQNP RE-------- ---------- ---------- ---------- 151 200 ENSTTRP00000001428/1-264 RRAIKQVLKC DVTQSWPLGA VPLPPADCLL STLCLDAACP DLPAYRAALR ENSBTAP00000001898/1-263 RRTVKRLLTC DVNQPRPLGS AQVPAADCVL SLLALECACR DVDAYRAAIQ bmy_13579T0/1-275 ----RRLLKC DANQPHPLGP AQVPPVDCML TLLALECACH DMDAYRAAGR BACU005837/1-221 ----RLLLKC DANQPHPLGP AQVPPVDCVL TLLALECACH DMDAYQAAGR 201 250 ENSTTRP00000001428/1-264 NLGSLLKPGG FLVLVDALKS SYYMIGEQRF SSLCLGREAV EAAVREAGYT ENSBTAP00000001898/1-263 NLVGLLKPGG HLVTLVALRC CEYMVGSRKF FVLSLEQETV EKALQEAGCQ bmy_13579T0/1-275 GLVSLLKPGG HLATAVALRT QHYMVGAKKF FGLHLEKETV EKALQEAGCH BACU005837/1-221 GLVSLLKPGG HLATAVALRT QHYMVDAKKF FGLHLEKETV EKALQEASCQ 251 300 ENSTTRP00000001428/1-264 IEQFEVISQS YSSNMASNEG LFSLVGRKLS ASV ENSBTAP00000001898/1-263 VLKCQYSPIK YSEAFCLNEG FCFVVARKGP GA- bmy_13579T0/1-275 VLRCQYSPVS YSEAHCINEG ICFVVARKGP GA- BACU005837/1-221 VLRYQYSPVS YSEAHCINEG ICFVVARKGP GA-