KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:56 2014 Check: 00 .. Name: ENSP00000357320/1-398 Len: 420 Check: 5386 Weight: 1.00 Name: ENSBTAP00000001589/1-397 Len: 420 Check: 8843 Weight: 1.00 Name: bmy_03392T0/1-381 Len: 420 Check: 1098 Weight: 1.00 Name: BACU003958/1-397 Len: 420 Check: 5100 Weight: 1.00 Name: ENSTTRP00000012648/1-381 Len: 420 Check: 8714 Weight: 1.00 // 1 50 ENSP00000357320/1-398 MMLKGITRLI SRIHKLDPGR FLHMGTQARQ SIAAHLDNQV PVESPRAISR ENSBTAP00000001589/1-397 -MLKGMTRLV SRVHKLDPGR FSHLGTQAPQ CPVAHLDNQV PTERTRAISR bmy_03392T0/1-381 ---------- -----LDPGR FLHIGTQAPQ CLAAHLDNQV AIESPRAISR BACU003958/1-397 -MLKGMTRLI SRVHKLDPGR FLHIGTQAPQ CLAAHLDNQV AIESPRAISR ENSTTRP00000012648/1-381 ---------- -----LDPGR FLHIGTQAPQ CLAAHLDNQV AIESPRAISR 51 100 ENSP00000357320/1-398 TNENDP---- ---------- --------AK HGDQHEGQHY NISPQDLETV ENSBTAP00000001589/1-397 TLENDP---- ---------- --------AK HGEQHVGQHY NISIQELKTV bmy_03392T0/1-381 TRFTLPSNWL HHSGQHQLYI YTVDLGTTAK HGEQHEGQHY NISFQDLKTV BACU003958/1-397 TSENDP---- ---------- --------AK HGEQHEGQHY NISFQDLKTV ENSTTRP00000012648/1-381 TSENDP---- ---------- --------AR HGEQHEGQHY NISFQDLKTV 101 150 ENSP00000357320/1-398 FPHGLPPRFV MQVKTFSEAC LMVRKPALEL LHYLKNTSFA YPAIRYLLYG ENSBTAP00000001589/1-397 FPHGLPPRFV MQVKTFNEAC LMVRKPALEL LHYLKNTNFA HPAVRYVLYG bmy_03392T0/1-381 FPHGLPPRFV MQVKTFNEAC LMVRRPALEL LHYLKNTNFA HPAVRY---- BACU003958/1-397 FPHGLPPRFV MQVKTFNEAC LMVRRPALEL LHYLKNTNFA HPAVRYVFYG ENSTTRP00000012648/1-381 FSHGLPPRFV MQVKTFNEAC LMVRRPALEL LH--KNTNFA HPAVRYVFYG 151 200 ENSP00000357320/1-398 EKGTGKTLSL CHVIHFCAKQ DWLILHIPDA HLWVKNCRDL LQSSYNKQRF ENSBTAP00000001589/1-397 EKGTGKTLSL CHIIHFCAKQ DWLILHIPDA HLWVKNCRDL LQSTYNKQRF bmy_03392T0/1-381 ---------- ---------- DWLILHIPDA HLWVKNCRDL LQSTYNKQRF BACU003958/1-397 EKGTGKTLSL CHVIHFCAKQ DWLILHIPDA HLWVKNCRDL LQSTYNKQRF ENSTTRP00000012648/1-381 EKGTGKTLSL CHSIHFCAKQ DWLILHIPDA HLWVKNCRDL LQSTYNKQRF 201 250 ENSP00000357320/1-398 DQPLEASTWL KNFKTTNERF LNQIKVQEKY VWNKRESTEK GSPLGEVVEQ ENSBTAP00000001589/1-397 DQPLEASIWL KNFKTANERF LSQIKVQDKY VWNKRESTEK GSPLAEVVEQ bmy_03392T0/1-381 DQPLEASTWL KNFKTANEHF LSQIKVQEKY VWNKRESTEK GSPLGEVVEQ BACU003958/1-397 DQPLEASTWL KNFKTANEHF LSQIKVQEKY VWNKRESTEK GSPLGEVVEQ ENSTTRP00000012648/1-381 DQPLEASTWL KNFKTANEHF LSQIKVQEKY VWNKRESTEK GSPLGEVVEQ 251 300 ENSP00000357320/1-398 GITRVRNATD AVGIVLKELK RQSSLGMFHL LVAVDGINAL WGRTTLKRED ENSBTAP00000001589/1-397 GIMRVRNATD AVGIVLKELK RQSSLGVFRL LVAVDGVNAL WGRTTLKRED bmy_03392T0/1-381 GIMRVRNATD AAGIVLKELK RQSSLGIFRL LVAVDGVNAL WGRTTLKRED BACU003958/1-397 GIMRVRNATD AAGIVLKELK RQSSLGIFRL LVAVDGVNAL WGRTTLKRED ENSTTRP00000012648/1-381 GITRVRNATD AVGIVLKELK RQSSLGIFRL LVAVDGVNAL WGRTTLKRED 301 350 ENSP00000357320/1-398 KSPIAPEELA LVHNLRKMMK NDWHGGAIVS ALSQTGSLFK PRKAYLPQEL ENSBTAP00000001589/1-397 KSPITPEELA LIYNLRKMVK NDWQGGAIVL TVSQTGSLFK PRKAYLPQEL bmy_03392T0/1-381 KSLIAPEELA FIYNLRKMVK NDWQGGAIVL TVSQTGSLFK PRKAYLPQEL BACU003958/1-397 KSPIAPEELA FIYNLRKMVK NDWQGGAIVL TVSQTGSLFK PRKAYLPQEL ENSTTRP00000012648/1-381 KSPIAPEELA FIYNLRKMVK NDWQGGAIVL TVSQTGSLFK PRKAYLPQEL 351 400 ENSP00000357320/1-398 LGKEGFDALD PFIPILVSNY NPKEFESCIQ YYLENNWLQH EKAPTEEGKK ENSBTAP00000001589/1-397 LGKEGFDTLD PFIPILVSNY NPKEFEGCIQ YYLENNWLQH EKAHTEEGKK bmy_03392T0/1-381 LGKEGFDALD PFIPILVSNY NPKEFESCIH YYSENNWLQH EKAHTEEGKK BACU003958/1-397 LGKEGFDALD PFIPILVSNY NPKEFESCIH YYLENNWLQH EKAHTEEGKK ENSTTRP00000012648/1-381 LGKEGFDALD PFIPILVSNY NPKEFESCIH YYLENNWLQH EKAHTEEGKK 401 450 ENSP00000357320/1-398 ELLFLSNANP SLLERHCAYL ENSBTAP00000001589/1-397 ELLFLSNRNP GLLERLCAYL bmy_03392T0/1-381 ELLFLSNRNP GQLERLCAYL BACU003958/1-397 ELLFLSNRNP GQLERLCAYL ENSTTRP00000012648/1-381 ELLFLSNRNP GQLERLCAYL