KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:11 2014 Check: 00 .. Name: ENSP00000315106/1-429 Len: 429 Check: 4707 Weight: 1.00 Name: ENSBTAP00000001087/1-421 Len: 429 Check: 3365 Weight: 1.00 Name: bmy_09901T0/1-414 Len: 429 Check: 5075 Weight: 1.00 Name: ENSTTRP00000003617/1-413 Len: 429 Check: 8161 Weight: 1.00 Name: BACU015346/1-125 Len: 429 Check: 633 Weight: 1.00 // 1 50 ENSP00000315106/1-429 MRVSVPGPAA AAAPAAGREP STPGGGSGGG GAVAAASGAA VPGSVQLALS ENSBTAP00000001087/1-421 MRVSVPG--- ---PAAGREP STPGG--GGG DAVAAASGAA VPGSVQLALS bmy_09901T0/1-414 MRASVPG--- ---PAAGREP STPGG--GGG -------GAA VPGSVQLALS ENSTTRP00000003617/1-413 MRASVPG--- ---PAAVREP SRPGR--GG- -------GAA VPSSVQLALS BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000315106/1-429 VLHALLYAAL FAFAYLQLWR LLLYRERRLS YQSLCLFLCL LWAALRTTLF ENSBTAP00000001087/1-421 ILHALLYAAL FAFAYLQLWR LLLYRERRLS YQSLCLFLCL LWAALRTTLF bmy_09901T0/1-414 ILHALLYAAL FAFAYLQLWR LLLYRERRLS YQSLCLFLCL LWAALRTTLF ENSTTRP00000003617/1-413 ILHALLYAAL FAFAYLQLWR LLLYRERRLS YQSLCLFICL LWAALRTTLF BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000315106/1-429 SAAFSLSGSL PLLRPPAHLH FFPHWLLYCF PSCLQFSTLC LLNLYLAEVI ENSBTAP00000001087/1-421 SAAFSLSGSL PLLRPPAHLH FFPHWLLYCF PSCLQFSTLC LLNLYLAEVI bmy_09901T0/1-414 SAAFSLSGSL PLLRPPAHLH FFPHWLLYCF PSCLQFSTLC LLNLYLAEVI ENSTTRP00000003617/1-413 SAAFSLSGSL PLLRPPAHLH FFPHWLLYCF PSCLQFSTLC LLNLYLAEXX BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000315106/1-429 CKVRCATELD RHKILLHLGF IMASLLFLVV NLTCAMLVHG DVPENQLKWT ENSBTAP00000001087/1-421 CKVRCATELD KHKILLHLGF ILASLLFLVV NLTCAMLVHG DVPENQLKWT bmy_09901T0/1-414 CKVRCATELD KHKILLHLGF ILASLLFLVV NLTCAMLVHG DVPENQLKWT ENSTTRP00000003617/1-413 XXXXXXXXXX XXXILLHLGF ILASLLFLVV NLTCAMLVHG DVPENQLKWT BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000315106/1-429 VFVRALINDS LFILCAISLV CYICKITKMS SANVYLESKG MSLCQTVVVG ENSBTAP00000001087/1-421 VFVRALINDS LFILCAISLV SYICKITKMS SANVYLESKG MSLCQTVVVG bmy_09901T0/1-414 VFVRALINDS LFILCAISLV SYICKITKMS SANVYLESKG MSLCQTVVVG ENSTTRP00000003617/1-413 VFVRALINDS LFILCAISLV SYICKITKMS SANVYLESKG MSLCQTVVVG BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000315106/1-429 SVVILLYSSR ACYNLVVVTI SQDTLESPFN YGWDNLSDKA HVEDISGEEY ENSBTAP00000001087/1-421 SVVILLYSSR ACYNLVVITI SQDTLESPFN YGWDNLSDKA HVKDISGEEY bmy_09901T0/1-414 SVVILLYSSR ACYNLVVITI SQDTLESPFN YGWDNLSDKA HVKDISGEEY ENSTTRP00000003617/1-413 SVVILLYSSR ACYNLVVITI SQDTLESPFN YGWDNLSDKA HVKDISGEEY BACU015346/1-125 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000315106/1-429 IVFGMVLFLW EHVPAWSVVL FFRAQRLNQN LAPAGMINSH SYSSRAYFFD ENSBTAP00000001087/1-421 IVFGMVLFLW EHVPAWSVVL FFRAQRLNQN LAPAGMINSH SYSSRAYFFD bmy_09901T0/1-414 IVFGMVLFLW EHVPAWSVVL FFRAQRLNQN LAPAGMINSH SYSSRAYFFD ENSTTRP00000003617/1-413 IVFGMVLFLW EHVPAWSVVL FFRAQRLNQN LAPAGMINSH SYSSRAYFFD BACU015346/1-125 ----MVLFLW EHVPAWSVVL FFRAQRLNQN LAPAGMINSH SYSSRAYFFD 351 400 ENSP00000315106/1-429 NPRRYDSDDD LPRLGSSREG SLPNSQSLGW YGTMTGCGSS SYTVTPHLNG ENSBTAP00000001087/1-421 NPRRYDSDDD LPRLGSSREG SLSNSQGLGW YGTMTGCGSS SYTVSPHLNG bmy_09901T0/1-414 NPRRYDSDDD LPRLGSSREG SLSNSQGLGW YGTMTGCGSN SYTVSPHLNG ENSTTRP00000003617/1-413 NPRRYDSDDD LPRLGSSREG SLSNSQGLGW YGTMTGCGSN SYTVSPHLNG BACU015346/1-125 NPRRYDSDDD LPRLGSSREG SLSNSQGLGW YGTMTGCGSN SYTVSPHLNG 401 450 ENSP00000315106/1-429 PMTDTAPLLF TCSNLDLNNH HSLYVTPQN ENSBTAP00000001087/1-421 PLTDTAPLLF TCSNLDMNSH HSLYVTPQN bmy_09901T0/1-414 PMTDTAPLLF TCSNLDMNNH HSLYVTPQN ENSTTRP00000003617/1-413 PMTDTAPLLF TCSNLDMNNH HSLYVTPQN BACU015346/1-125 PMTDTAPLLF TCSNLDMNNH HSLYVTPQN