KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:03 2014 Check: 00 .. Name: ENSP00000375840/1-381 Len: 459 Check: 8280 Weight: 1.00 Name: ENSBTAP00000001040/1-343 Len: 459 Check: 6127 Weight: 1.00 Name: bmy_14200T0/1-428 Len: 459 Check: 4039 Weight: 1.00 Name: ENSTTRP00000014435/1-336 Len: 459 Check: 6260 Weight: 1.00 // 1 50 ENSP00000375840/1-381 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001040/1-343 ---------- ---------- ---------- ---------- ---------- bmy_14200T0/1-428 RSRGLRAHGA VGRQAAGGAR PQKPTQRRTP ADKGWAELLP APSRWRGGGW ENSTTRP00000014435/1-336 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000375840/1-381 ---------- ---------- --------MA AFGRQVLDWH RLIPLTWACM ENSBTAP00000001040/1-343 ---------- ---------- --------MA ALGRQVFDWH RLTPLTWALL bmy_14200T0/1-428 KRRTRRAEAA DPGDGCFRRQ RHCRCVRAMA ALSRQVSAWH HLIPLTWSLI ENSTTRP00000014435/1-336 ---------- ---------- --------MA ALGRQVLDGH RLIPLTWSLI 101 150 ENSP00000375840/1-381 ARQTPHLGEQ RRTTASLLRK LTTASNGGVI EELSCVRSNN YVQEPECRRN ENSBTAP00000001040/1-343 ARQTPQPAGQ KRTAAFLLCK LMTVSSGGGL EESSFVEPPK CAQKPEHRTG bmy_14200T0/1-428 ARQTAQLGEQ KRTAAFLLRK LTTVSSGGGL GESPFVEPQK CTQEPEHRTG ENSTTRP00000014435/1-336 ARQTTRLGGQ KRTTAFLLRK LTMVSSGGGL GESPSVEPQK YVQEPEHRTG 151 200 ENSP00000375840/1-381 LVQCLLEKQG TPVVQGSLEL ERVMSSLLDM GFSNAHINEL LSVRRGASLQ ENSBTAP00000001040/1-343 LIQCLLEKQR TPVLQE---- -NFVRSLRDM GFSDVHVNEL LSIQPGTHPQ bmy_14200T0/1-428 LTQCLLEKQR MAVERG---- -KIVSSLLDM GFSDVHVNEL LSIQPATHPQ ENSTTRP00000014435/1-336 LTQCLLEKQR TAVERE---- -KVVSSLLDM GFSDVHVNEL LSIQPGTHPQ 201 250 ENSP00000375840/1-381 QLLDIISEFI LLGLNPEPVC VVLKKSPQLL KLPIMQMRKR SSYLQKLGLG ENSBTAP00000001040/1-343 QMLDIISELI LLGLNPEPVC VALKKSPQLL KLPVMQMKKR SSYLRKLGLG bmy_14200T0/1-428 QLLDIISELI LLGLNPEPVC VAFKKSPQLL KLPVMQMKKR SSYLRKLGLG ENSTTRP00000014435/1-336 QLLDIISELI LLGLNPEPVC VALKKSPQLL KLPVMHMKKR SSYLRKLGLG 251 300 ENSP00000375840/1-381 EGKLKRVLYC CPEIFTMRQQ DINDTVRLLK EKCLFTVQQV TKILHSCPSV ENSBTAP00000001040/1-343 EGKLKRVLYC CPEIFTMRQR DIEVIVGVLK EKCLFTVKQV TEILHRCPYV bmy_14200T0/1-428 EGKLKRVLYC CPEIFTMRQR DIEIIVGVLK EKCLFTVKQV TEILHRCPCV ENSTTRP00000014435/1-336 EGKLKRVLYS CPEIFTMRQR DIESIVGVLK EKCLFTVKQV TEILHRCPCV 301 350 ENSP00000375840/1-381 LREDLGQLEY KFQYAYFRMG IKHPDIVKSE YLQYSLTKIK QRHIYLERLG ENSBTAP00000001040/1-343 LREDPGELEY KFQYAYFRMG IKHVDIVKTD LLQYSMTKTK QRHVFLERLG bmy_14200T0/1-428 LREDPGELEY KFQYAYFRMG INHVDVVKTD FLQYSMTKTK ERHVFLERLG ENSTTRP00000014435/1-336 LREDPGELEY KFQYAYFRMG IKHVDVVKTD FLQYSMTKTK ERHVFLERLG 351 400 ENSP00000375840/1-381 RYQTPDKKGQ TQIPNPLLKD ILRVSEAEFL ARTACTSVEE FQVFKKLLAR ENSBTAP00000001040/1-343 RYQTPDKKGQ TQVPNPLLKD ILRVSEAEFL ARTAVSSAEE FEVFKKLLAR bmy_14200T0/1-428 RYQTPDKKGQ TLVPNPLLKD ILRVSEAEFL AKTACSSAEE FEVFKKLLAR ENSTTRP00000014435/1-336 RYQTPDKKGQ TLVPNPLLRD ILRVSEAEFL AKTACSSAEE FGVFKELLAR 401 450 ENSP00000375840/1-381 EEEESESSTS DDKRASLDED EDDDDEEDND EDDNDEDDDD EDDDEAEDND ENSBTAP00000001040/1-343 EEEEPEGCMA DDE--SLDEE EEEDREEE-- ---------- ---------- bmy_14200T0/1-428 EEEESEGRMA DDE--SLEEE EEEEEEPEEG EEREP----- ---------- ENSTTRP00000014435/1-336 EEEESEGRMA DAG--SPEEA G--------- ---------- ---------- 451 500 ENSP00000375840/1-381 EDEDDDEEE ENSBTAP00000001040/1-343 --------- bmy_14200T0/1-428 --------- ENSTTRP00000014435/1-336 ---------