KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:12:56 2014 Check: 00 .. Name: ENSBTAP00000000993/1-271 Len: 271 Check: 3621 Weight: 1.00 Name: ENSTTRP00000000321/1-251 Len: 271 Check: 4438 Weight: 1.00 Name: bmy_13583T0/1-249 Len: 271 Check: 2048 Weight: 1.00 Name: BACU005835/1-271 Len: 271 Check: 4894 Weight: 1.00 // 1 50 ENSBTAP00000000993/1-271 MASEFKKKLF WRAVVAEFLA MILFIFISIG SALGFHYPIK SNQTTGAVQD ENSTTRP00000000321/1-251 MASEFKKKLF WRAVVAEFLA MTLFIFISIG SALGFQYPIK SNQTTGAVQD bmy_13583T0/1-249 MASEFKKKLF WRAVVAEFLA MTLFIFISIG SALGFQYPIK SNQTTGAVQD BACU005835/1-271 MASEFKKKLF WRAVVAEFLA MTLFIFISIG SALGFQYPIK SNQTTGAVQD 51 100 ENSBTAP00000000993/1-271 NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAIMYI ENSTTRP00000000321/1-251 NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGILLSCQ MSVLRAVMYI bmy_13583T0/1-249 NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ MSVLRAVMYI BACU005835/1-271 NVKVSLAFGL SIATLAQSVG HISGAHLNPA VTLGLLLSCQ ISVLRAVMYI 101 150 ENSBTAP00000000993/1-271 IAQCVGAIVA TAILSGITSS LPDNSLGLNA LAPGVNSGQG LGIEIIGTLQ ENSTTRP00000000321/1-251 MAQCVGAIVA TAILSGITSS LPNNSLGLNA LAPGVNSGQG LGIEIIGTLQ bmy_13583T0/1-249 MAQCVGAI-- ---------- ---------- LAPGVNSGQG LGIEIIGTLQ BACU005835/1-271 MAQCVGAIVA TAILSGVTSS LPNNSLGLNA LAPGVNSGQG LGIEIIGTLQ 151 200 ENSBTAP00000000993/1-271 LVLCVLATTD RRRRDLGGSG PLAIGFSVAL GHLLAIDYTG CGINPARSFG ENSTTRP00000000321/1-251 LVLCVLATTD RRRRDLGGSA PLAIGLSVAL GHLLAIDYTG CSINPARSFG bmy_13583T0/1-249 LVLCVLATTD RRRRDLGGSA PLAIGLSVAL GHLLAIDYTG CSINPARSFG BACU005835/1-271 LVLCVLATTD RRRRDLGGSA PLAIGLSVAL GHLLAIDYTG CSINPARSFG 201 250 ENSBTAP00000000993/1-271 SSVITHNFQD HWIFWVGPFI GAALAVLIYD FILAPRSSDL TDRVKVWTSG ENSTTRP00000000321/1-251 SAVITHNFQD HWIFWVGPFI GGALIVLIYD FILTPRSSDL TDR------- bmy_13583T0/1-249 SAVITRNFQD HWIFWVGPFI GGALAVLIYD FILAPRSSDL TDRVKVWTSG BACU005835/1-271 SAVITRNFQD HWIFWVGPFI GGALAVLIYD FILAPRSSDL TDRVKMWTSG 251 300 ENSBTAP00000000993/1-271 QVEEYDLDAD DINSRVEMKP K ENSTTRP00000000321/1-251 ---------- ---XRVKMKP K bmy_13583T0/1-249 QVEEYDLDAD DINSRVEMKP K BACU005835/1-271 QVEEYDLDAD DINSRVEMKP K