KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:12:33 2014 Check: 00 .. Name: ENSP00000363817/1-537 Len: 537 Check: 1564 Weight: 1.00 Name: ENSBTAP00000000860/1-532 Len: 537 Check: 6698 Weight: 1.00 Name: BACU018870/1-458 Len: 537 Check: 2426 Weight: 1.00 Name: bmy_14321T0/1-537 Len: 537 Check: 7807 Weight: 1.00 Name: ENSTTRP00000004036/1-457 Len: 537 Check: 2506 Weight: 1.00 // 1 50 ENSP00000363817/1-537 MSWAARPPFL PQRHAAGQCG PVGVRKEMHC GVASRWRRRR PWLDPAAAAA ENSBTAP00000000860/1-532 MSWAARPPFL PQRHAAGQCG PVGVRKEMHC GVASRWRRRR PWLDPAAAAA BACU018870/1-458 ---------- ---------- ---------- ---------- ---------- bmy_14321T0/1-537 MSWAARPPFL PQRHAAGQCG PVGVRKEMHC GVASRWRRRR PWLDPAAAAA ENSTTRP00000004036/1-457 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000363817/1-537 AAVAGGEQQT PEPEPGEAGR DGMGDSGRDS RSPDSSSPNP LPQGVPPPSP ENSBTAP00000000860/1-532 AAAAGG-QQA PEPEPGEAGR DGMGDSGRDS RSPDSSSPNP LPQGAAPPSP BACU018870/1-458 ---------- ---------- ---------S RSPDSSSPNP LPQGAAPPSP bmy_14321T0/1-537 AAVAAGEQQT PEPEPGEAGR DGMGDSGRDS RSPDSSSPNP LPQGAAPPSP ENSTTRP00000004036/1-457 ---------- ---------- ---------S RSPDSSSPNP LPQGAAPPSP 101 150 ENSP00000363817/1-537 PGPPLPPSTA PSLGGSGAPP PPPMPPPPLG SPFPVISSSM GSPGLPPPAP ENSBTAP00000000860/1-532 PGPPLPPSAA ASLGGSGAPP PPSMPPPPLG SPFPVISSSM GSPGLPPPAP BACU018870/1-458 PGPPLPPSAA ASLGGSGAPP PPPMPPPPLG SPFPVISSSW GSPGLPPPAP bmy_14321T0/1-537 PGPPLPPSAA ASLGGSGAPP PPPMPPPPLG SPFPVISSSM GSPGLPPPAP ENSTTRP00000004036/1-457 PGPPLPPSAA ASLGGSGAPP PPPMPPPPLG SPFPVISSSM GSPGLPPPAP 151 200 ENSP00000363817/1-537 PGFSGPVSSP QINSTVSLPG GGSGPPEDVK PPVLGVRGLH CPPPPGGPGA ENSBTAP00000000860/1-532 PGFSGPVSSP QINSTVSLPG GGSGPPEDVK PPVLGVRGLH CPPPPGGPGA BACU018870/1-458 PGFSGPVSSP QINSTVSLPG GGSGPPEDVK PPVLGVRGLH CPPPPGGPGA bmy_14321T0/1-537 PGFSGPVSSP QINSTVSLPG GGSGPPEDVK PPVLGVRGLH CPPPPGGPGA ENSTTRP00000004036/1-457 PGFSGPVSSP QINSTVSLPG GGSGPPEDVK PPVLGVRGLH CPPPPGGPGA 201 250 ENSP00000363817/1-537 GKRLCAICGD RSSGKHYGVY SCEGCKGFFK RTIRKDLTYS CRDNKDCTVD ENSBTAP00000000860/1-532 GKRLCAICGD RSSGKHYGVY SCEGCKGFFK RTIRKDLTYS CRDNKDCTVD BACU018870/1-458 GKRLCAICGD RSSGKHYGVY SCEGCKGFFK RTIRKDLTYS CRDNKDCTVD bmy_14321T0/1-537 GKRLCAICGD RSSGKHYGVY SCEGCKGFFK RTIRKDLTYS CRDNKDCTVD ENSTTRP00000004036/1-457 GKRLCAICGD RSSGKHYGVY SCEGCKGFFK RTIR-DLTYS CRDNKDCTVD 251 300 ENSP00000363817/1-537 KRQRNRCQYC RYQKCLATGM KREAVQEERQ RGKDKDGDGE GAGGAPEEMP ENSBTAP00000000860/1-532 KRQRNRCQYC RYQKCLATGM KREAVQEERQ RGKDKDGDGE GAGGAPEEMP BACU018870/1-458 KRQRNRCQYC RYQKCLATGM KREAVQEERQ RGKDKDGDGE GAGGAPEEMP bmy_14321T0/1-537 KRQRNRCQYC RYQKCLATGM KREAVQEERQ RGKDKDGDGE GAGGAPEEMP ENSTTRP00000004036/1-457 KRQRNRCQYC RYQKCLATGM KREAVQEERQ RGKDKDGDGE GAGGAPEEMP 301 350 ENSP00000363817/1-537 VDRILEAELA VEQKSDQGVE GPGGTGGSGS SPNDPVTNIC QAADKQLFTL ENSBTAP00000000860/1-532 VDRILEAELA VEQKSDQGVE GPGGTGGSGS SPNDPVTNIC QAADKQLFTL BACU018870/1-458 VDRILEAELA VEQKSDQGVE GPGGTAGSGS SPNDPVTNIC QAADKQLFTL bmy_14321T0/1-537 VDRILEAELA VEQKSDQGVE GPGGTAGSGS SPNDPVTNIC QAADKQLFTL ENSTTRP00000004036/1-457 VDRILEAELA VEQKSDQGVE GPGGTAGSGS SPNDPVTNIC QAADKQLFTL 351 400 ENSP00000363817/1-537 VEWAKRIPHF SSLPLDDQVI LLRAGWNELL IASFSHRSID VRDGILLATG ENSBTAP00000000860/1-532 VEWAKRIPHF SSLPLDDQVI LLRAGWNELL IASFSHRSID VRDGILLATG BACU018870/1-458 VEWAKRIPHF SSLPLDDQVI LLRAGWNELL IASFSHRSID VRDGILLATG bmy_14321T0/1-537 VEWAKRIPHF SSLPLDDQVI LLRAGWNELL IASFSHRSID VRDGILLATG ENSTTRP00000004036/1-457 VEWAKRIPHF SSLPLDDQVI LLRAGWNELL IASFSHRSID VRDGILLATG 401 450 ENSP00000363817/1-537 LHVHRNSAHS AGVGAIFDRS LSRVLTELVS KMRDMRMDKT ELGCLRAIIL ENSBTAP00000000860/1-532 LHVHRNSAHS AGVGAIFD-- --RVLTELVS KMRDMRMDKT ELGCLRAIIL BACU018870/1-458 LHVHRNSAHS AGVGAIFDRS LSRVLTELVS KMRDMRMDKT ELGCLRAIIL bmy_14321T0/1-537 LHVHRNSAHS AGVGAIFDRS LSRVLTELVS KMRDMRMDKT ELGCLRAIIL ENSTTRP00000004036/1-457 LHVHRNSAHS AGVGAIFDRS LSRVLTELVS KMRDMRMDKT ELGCLRAIIL 451 500 ENSP00000363817/1-537 FNPDAKGLSN PSEVEVLREK VYASLETYCK QKYPEQQGRF AKLLLRLPAL ENSBTAP00000000860/1-532 FNPDAKGLSN PSEVEVLREK VYASLETYCK QKYPEQQGRF AKLLLRLPAL BACU018870/1-458 FNPDAKGLSN PSEVEVLREK VYASLETYCK QKYPEQQGRF AKLLLRLPAL bmy_14321T0/1-537 FNPDAKGLSN PSEVEVLREK VYASLETYCK QKYPEQQGRF AKLLLRLPAL ENSTTRP00000004036/1-457 FNPDAKGLSN PSEVEVLREK VYASLETYCK QKYPEQQGRF AKLLLRLPAL 501 550 ENSP00000363817/1-537 RSIGLKCLEH LFFFKLIGDT PIDTFLMEML EAPHQLA ENSBTAP00000000860/1-532 RSIGLKCLEH LFFFKLIGDT PIDTFLMEML EAPHQLA BACU018870/1-458 RSIGLKCLEH LFFFKLIGDT PIDTFLMEML EAPHQLA bmy_14321T0/1-537 RSIGLKCLEH LFFFKLIGDT PIDTFLMEML EAPHQLA ENSTTRP00000004036/1-457 RSIGLKCLEH LFFFKLIGDT PIDTFLMEML EAPHQLA