KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:32 2014 Check: 00 .. Name: ENSP00000357219/1-582 Len: 589 Check: 6340 Weight: 1.00 Name: ENSBTAP00000000517/1-575 Len: 589 Check: 1920 Weight: 1.00 Name: bmy_03419T0/1-537 Len: 589 Check: 8110 Weight: 1.00 Name: BACU003935/1-542 Len: 589 Check: 6608 Weight: 1.00 Name: ENSTTRP00000001045/1-572 Len: 589 Check: 287 Weight: 1.00 // 1 50 ENSP00000357219/1-582 MSSPNPEDVP RRPEPEPSSS NKKKKKRKWL RQEASIQALT RAGHGALQAG ENSBTAP00000000517/1-575 MSSLNTEDTP QEPSLSSSSS KKKKKKRKWP QQEATIQALT RAGHRALLAG bmy_03419T0/1-537 MSSLNTEDTP QEPSPSPSSS KKKKKKRKWP RQEASIQALT RAGHRALLAG BACU003935/1-542 MSSLNTEDTP QEPSPSPSSS KKKKKTRKWP RQEASIQALT RAGHRALLAG ENSTTRP00000001045/1-572 MSSLNTEDTL QEPSPSPSSS KKKKKKRKWP LQEARIQALT RAGHRALLAG 51 100 ENSP00000357219/1-582 QNHEALNNFQ RAFLLASKAP QTRDTPVLQA CAFNLGAAYV ETGDPARGLE ENSBTAP00000000517/1-575 WNHEALTSFQ RAFLLASKSP QTRDTPVLRA CAFNLGAAYV ETGDPARGLE bmy_03419T0/1-537 QNHKALTSFQ RAFLLASKSP QTRDIPVLRA CAFNLGAAYV ETGDPARGLE BACU003935/1-542 QNHKALTSFQ RAFLLASKSP QTRDIPVLRA CAFNLGAAYV ETGDPARGLE ENSTTRP00000001045/1-572 QNHEALTSFQ RAFLLASKSP QTRDTPVLRA CAFNLGAAYV ETGDPARGLE 101 150 ENSP00000357219/1-582 LLLRAHPEEK AQGRRHGDQC FNVALAYHAL GELPQALAWY HRALGHYQPQ ENSBTAP00000000517/1-575 LLLRAQPQET AQGGCHGDQC FNVALAYHAL GDLPQALAWY HKALCHYQPL bmy_03419T0/1-537 LLLRAQPQET AQGGCHGDQC FNVALAYHAL GDLPQALAWY HKALGHYQPL BACU003935/1-542 LLLRAQPQET AQGGCHGDQC FNVALAYHAL GDLPQALAWY HKALGHYQPL ENSTTRP00000001045/1-572 LLLRAQPQET AQGGCHGDQC FNVALAYHAL GDLPQALAWY HKALGHYQPL 151 200 ENSP00000357219/1-582 GDQGEAWAKM GACYQALGQP ELAAHCLQEA SQAYAQERQL RAAALALGAA ENSBTAP00000000517/1-575 GDQGQAQAKM GACYRALGQP GLAAHCLQEA SRAYAQAGQP QAAALTLGAA bmy_03419T0/1-537 GDQGQAQAKM GACYQALGQP ELAAHCLQEA SRAYAQAGQP RAAALALGAA BACU003935/1-542 GDQGQAQAKM GACYQALGQP ELAAHCLQEA SRAYAQAGQP RAAALALGAA ENSTTRP00000001045/1-572 GDQGQAQAKM GACYQALGQP ELAAHCLQEA SRAYAQAGQP RAAALTLGAA 201 250 ENSP00000357219/1-582 AGCMLKSGRH RVGEVVQVLE KSRRLAERST ERRLLGHLYN DLGLGYSQLQ ENSBTAP00000000517/1-575 AGCMLKSGQH GAGEVMQVLE ESRRLAERST ERGLLGQLYN DLGLGYSQLQ bmy_03419T0/1-537 AGCMLKSGQH GVGDVVQVLE ESRRLAERST ERGLLGQLYN DLGLGYSQLQ BACU003935/1-542 AGCMLKSGQY GVGDVVQVLE ESRRLAERST ERGLLGQLYN DLGLGYFQLQ ENSTTRP00000001045/1-572 AGCMLKSGQH GVGDVLQVLE ESRRLAERST ERGLLGQLYN DLGVGYSQLQ 251 300 ENSP00000357219/1-582 LFPLAVEAFL QALPLCWVPG EQATVLRNLG MAHNALGNYQ EAREFHQKAA ENSBTAP00000000517/1-575 LFPLAVEAFL QALPLCREPG EEATVLRNLG MVHNALGNYQ EARELHQKAA bmy_03419T0/1-537 LFPLAAEAFR QALPLCRGPG EEATVLRNLG MTHNALGNYQ EAREFHQKAA BACU003935/1-542 LFPLAAEAFR QALPLCRGPG EEATVLRNLG MTHNALGNYQ EAREFHQKAA ENSTTRP00000001045/1-572 LFPLAAEAFQ QALPLCRGPG EEATVLRNLG MAHNALGNYQ EAREFHQKAA 301 350 ENSP00000357219/1-582 DLHGSVGQRW EQGRSFGSLA FALSQLGDHK AARDNYLHAL QAARDS--GD ENSBTAP00000000517/1-575 DLHGSVGQRR EQGWSFGSLA FAVSQLGDHK AARDNYLHAL QAARDT--GD bmy_03419T0/1-537 DTHGSVGQRW EQGRSFGSLA FALSQLGDHK AARDNYLHAL QAARDTGEGD BACU003935/1-542 DTHGSVGQRW EQGRSFGSLA FALSQLGDHK AARDNYLHAL QAARDT--GD ENSTTRP00000001045/1-572 DTHGSVGQRW EQGRSFGSLA FALSQLGDHK AARDNYLHAL QAARDT--GD 351 400 ENSP00000357219/1-582 MKGQWQACEG LGAAAARLGQ YDQALKYYKE ALAQCQKEPD SVRERLVAKL ENSBTAP00000000517/1-575 VKGQWQACEG LGAAAARLGQ HDQALKYYKE ALARSPKESD SVRERLVAKL bmy_03419T0/1-537 VKGQWQACEG LGAAAARLGQ HDQALKYYKE ALARCQKEPD SVRERLVAKL BACU003935/1-542 VKGQWQACEG LGAAAARLGQ HDQALKYYKE ALARCQKEPD SVRERLVAKL ENSTTRP00000001045/1-572 VKGQWQACEG LGAAAARLGQ HDQALKYYKE ALARCQKEPD SVRERLVAKL 401 450 ENSP00000357219/1-582 ADTVRTRLAQ VGLVQTHTLT SAPGRLQAPG GASQAEGTPA KAGSSTAGVQ ENSBTAP00000000517/1-575 TDAIRTHLAR GGLLPTHTLT SAPERSLAPG GGGLVEGTPA RVGRGAPGVQ bmy_03419T0/1-537 TDAIRTHLAR GGLLPTHTLT SAPGGPQAPG GACPVVGTPA RVGKGTAGVR BACU003935/1-542 TDAIRTHLAR GGLLPTHTLT SAPGGPQAPG GACPVVGTPA RVGKDTAGVQ ENSTTRP00000001045/1-572 TDAIRTHLAR GGLLPTHTLT SAPGGPQAPG GACPVVGTPA RVGKGTAGVR 451 500 ENSP00000357219/1-582 HRSSSGWEDE EFEEGHQKKK EERSANVPVR AGPGRPELCF LPGTVNHSHH ENSBTAP00000000517/1-575 HRSSGGWED- ELEEDHEGKE EE-SANVPTS -RAPRLEVCF LPGTRHTGES bmy_03419T0/1-537 HRSSNRWED- ELEEGHEGKE EE-SANVLMT SWAPRLE--- ---------- BACU003935/1-542 HRSSNRWED- ELEEGHEGKE EE-SANVLTT SWAPRLE--- ---------- ENSTTRP00000001045/1-572 HRFSDRWED- ELEEGHKGKE EE-SANVLTT AWTPRLELCF LPGMVNHPQF 501 550 ENSP00000357219/1-582 LASSCPTFTK HTPCRGTVLG KASIYSPGPR AHLPFVGPGP PRAEYPSI-- ENSBTAP00000000517/1-575 FPSSQSKFAK HLPYTGG--- -SSAYNPRPK AHLSFGGQGP LRMENPGL-- bmy_03419T0/1-537 ---------- ---------- ---------- -RISDTXESS PTLVGPGLPS BACU003935/1-542 ---------- ---------- -----RPRPR AHLSFGGQGP LRMENPGL-- ENSTTRP00000001045/1-572 ---SRSRFAK HLPCTG---- -VSVYSPRPK SHLSLGAQGP LRMENPGL-- 551 600 ENSP00000357219/1-582 --LVPNGPQA NRSSRWP-RE SLSRSRQRRP MESGICTIV ENSBTAP00000000517/1-575 --LVPNVPRG NRSFKQP-RE PPGRNPQKRS MESGFCIIM bmy_03419T0/1-537 TCPVQVSPLC RVTNTSPDTH PPCSSPKDVS FPP------ BACU003935/1-542 --LVTNGPHS KRSSKQP-RE PPSRNPQRRS TESGFCRIM ENSTTRP00000001045/1-572 --LVTNGPHS KRSSKQP-RE PPSRNPQRRS TESGFCMIM