KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:11:06 2014 Check: 00 .. Name: ENSTTRP00000013843/1-593 Len: 620 Check: 3139 Weight: 1.00 Name: ENSP00000345096/1-599 Len: 620 Check: 8678 Weight: 1.00 Name: BACU006818/1-484 Len: 620 Check: 9685 Weight: 1.00 Name: bmy_14113T0/1-537 Len: 620 Check: 4724 Weight: 1.00 Name: ENSBTAP00000000374/1-571 Len: 620 Check: 8945 Weight: 1.00 // 1 50 ENSTTRP00000013843/1-593 MEEPRAPP-- ------PLQG GGAADVPEPG ARQHPGHETA AQRYSARLLQ ENSP00000345096/1-599 MEGPLTPP-- ------PLQG GGAAAVPEPG ARQHPGHETA AQRYSARLLQ BACU006818/1-484 -----MPP-- ---------- -------ETN SRLDNG---- ---------- bmy_14113T0/1-537 MEEPRAPPAG SGPLPPPLQG GGAADVPEPG ARQHPGHETA AQRYSARLLQ ENSBTAP00000000374/1-571 MEEPRAPPAG SAPFPVSLQG GGTADVPEPG ARQHPGHETA AQRYSARLLQ 51 100 ENSTTRP00000013843/1-593 AGYEPESPGS DLTTHLPELS S-----VFLA GVGVQMEGLL GVDMADYLIS ENSP00000345096/1-599 AGYEPESPRL DLATHPTTPR SELSSVVLLA GVGVQMDRLR RASMADYLIS BACU006818/1-484 ---------- ---------- ---------- ---------- ---------- bmy_14113T0/1-537 AGYEPES--- ---------- ---------- ---------- ---------- ENSBTAP00000000374/1-571 AGYEPES--- ---------- ---------- ---------- ---MADYLIS 101 150 ENSTTRP00000013843/1-593 GGTGYVPEDG LTAQQLFANA DGLTYNDFLI LPGFIDFTAD EVDLTSALTR ENSP00000345096/1-599 GGTGYVPEDG LTAQQLFASA DGLTYNDFLI LPGFIDFIAD EVDLTSALTR BACU006818/1-484 ---------- ---------- ---------- ---FIDFTAD EVDLTSALTR bmy_14113T0/1-537 ---------- ---------- ------DFLI LPGFIDFTAD EV-------- ENSBTAP00000000374/1-571 GGTGYVPEDG LTAQQLFANA DGLTYNDFLI LPGFIDFTAD EVDLTSALTR 151 200 ENSTTRP00000013843/1-593 KITLKTPLIS SPMDTVTEAD MAIAMALMGG IGFIHHNCTP EFQANEVRKV ENSP00000345096/1-599 KITLKTPLIS SPMDTVTEAD MAIAMALMGG IGFIHHNCTP EFQANEVRKV BACU006818/1-484 KITLKTPLIS SPMDTVTEAD MAIAMALMGG IGFIHHNCTP EFQANEVRK- bmy_14113T0/1-537 -ITLKTPLIS SPMDTVTEAD MAIAMALMGG IGFIHHNCTP EFQANE---- ENSBTAP00000000374/1-571 KITLKTPLIS SPMDTVTEAD MAIAMALMGG IGFIHHNCTP EFQANEVRKV 201 250 ENSTTRP00000013843/1-593 KKFEQGFITD PVVLSPSHTV GDVLEAKIRH GFSGIPITET GTMGSKLVGI ENSP00000345096/1-599 KKFEQGFITD PVVLSPSHTV GDVLEAKMRH GFSGIPITET GTMGSKLVGI BACU006818/1-484 -KFEQGFITD PVVLSPSHTV GDVLEAKIRH GFSGIPITET GTMGSKLVGI bmy_14113T0/1-537 -KFEQGFITD PVVLSPSHTV GDVLEAKIRH GFSGIPITET GTMGSKLVGI ENSBTAP00000000374/1-571 KKFEQGFITD PVVLSPSHTV GDVLEAKIRH GFSGIPITET GTMGSKLVGI 251 300 ENSTTRP00000013843/1-593 VTSRDIDFLA EKDHTTLLSE VMTPRNELVV APAGVTLKEA NEILQRSKK- ENSP00000345096/1-599 VTSRDIDFLA EKDHTTLLSE VMTPRIELVV APAGVTLKEA NEILQRSKK- BACU006818/1-484 VTSRDIDFLA EKDHTTLLSE VMTPRNELVV APAGVTLKEA NEILQRSKK- bmy_14113T0/1-537 VTSRDIDFLA EKDHTTLLSE VMTPRNELVV APAGVTLKEA NEILQRSKKE ENSBTAP00000000374/1-571 VTSRDIDFLA EKDHTTLLSE VMTPRNELVV APAGVTLKEA NEILQRSKK- 301 350 ENSTTRP00000013843/1-593 ---------- --GKLPIVND RDELVAIIAR TDLKKNRDYP LASKDSHKQL ENSP00000345096/1-599 ---------- --GKLPIVND CDELVAIIAR TDLKKNRDYP LASKDSQKQL BACU006818/1-484 ---------- --GKLPIVND RDELVAIIAR TDLKKNRDYP LASKDSHKQL bmy_14113T0/1-537 ACSFSSPLRS LSGKLPIVND RDELVAIIAR TDLKKNRDYP LASKDSHKQL ENSBTAP00000000374/1-571 ---------- --GKLPIVND RDELVAIIAR TDLKKNRDYP LASKDSHKQL 351 400 ENSTTRP00000013843/1-593 LCGAAVGTRE DDKYRLDLLT QAGADVIVLD SSQGNSVYQI AMVHYIKQKY ENSP00000345096/1-599 LCGAAVGTRE DDKYRLDLLT QAGVDVIVLD SSQGNSVYQI AMVHYIKQKY BACU006818/1-484 LCGAAVGTRE DDKYRLDLLT QAGADVIVLD SSQGNSVYQI AMVHYIKQKY bmy_14113T0/1-537 LCGAAVGTRE DDKYRLDLLT QAGADVIVLD SSQGNSVYQI AMVHYIKQKY ENSBTAP00000000374/1-571 LCGAAVGTRE DDKYRLDLLT QAGADVIVLD SSQGNSVYQI AMVHYIKQKY 401 450 ENSTTRP00000013843/1-593 PRLQVIGGNV VTAAQAKNLI DAGVDGLRVG MGCGSICITQ EVMACGRPQG ENSP00000345096/1-599 PHLQVIGGNV VTAAQAKNLI DAGVDGLRVG MGCGSICITQ EVMACGRPQG BACU006818/1-484 PRLQVIGGNV VTAAQAKNLI DAGVDGLRVG MGCGSICITQ EVMACGRPQG bmy_14113T0/1-537 PRLQVIGGNV VTAAQAKNLI DAGVDGLRVG MGCGSICITQ EVMACGRPQG ENSBTAP00000000374/1-571 PHLQVIGGNV VTAAQAKNLI DAGVDGLRVG MGCGSICITQ EVMACGRPQG 451 500 ENSTTRP00000013843/1-593 TAVYKVAEYA RRFGVPVIAD GGIQTVGHVV KALALGASTV MMG-LLAATT ENSP00000345096/1-599 TAVYKVAEYA RRFGVPIIAD GGIQTVGHVV KALALGASTV MMGSLLAATT BACU006818/1-484 TAVYKVAEYA RRFGVPVIAD GGIQTVGHVV KALALGASTV MMGSLLAATT bmy_14113T0/1-537 TAVYKVAEYA RRFGVPVIAD GGIQTVGHVV KALALGASTV MMGSLLAATT ENSBTAP00000000374/1-571 TAVYKVAEYA RRFGVPVIAD GGIQTVGHVV KALALGASTV MMGSLLAATT 501 550 ENSTTRP00000013843/1-593 EAPGEYFFSX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000345096/1-599 EAPGEYFFSD GVRLKKYRGM GSLDAMEKSS SSQKRYFSEG DKVKIAQGVS BACU006818/1-484 EAPGEYFFSD GVRLKKYRGM GSLDAMEKSS SSQKRYFSEG DKVKIAQGVS bmy_14113T0/1-537 EAPGEYFFSD GVRLKKYRGM GSLDAMEKSS SSQKRYFSEG DKVKIAQGVS ENSBTAP00000000374/1-571 EAPGEYFFSD GVRLKKYRGM GSLDAMEKSS SSQKRYFSEG DKVKIAQGVS 551 600 ENSTTRP00000013843/1-593 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXSMMY SGELKFEKRT ENSP00000345096/1-599 GSIQDKGSIQ KFVPYLIAGI QHGCQDIGAR SLSVLRSMMY SGELKFEKRT BACU006818/1-484 GSIQDKGSIQ KFVPYLIAGI QHGCQDIGAR SLSVLRSMMY SGELKFEKRT bmy_14113T0/1-537 GSIQDKGSIQ KFVPYLIAGI QHGCQDIGAR SLSVLRSMMY SGELKFEKRT ENSBTAP00000000374/1-571 GSIQDKGSIQ KFVPYLIAGI QHGCQDIGAR SLSVLRSMMY SGELKFEKRT 601 650 ENSTTRP00000013843/1-593 MSAQIEGGVH GLHSYEKRLY ENSP00000345096/1-599 MSAQIEGGVH GLHSYEKRLY BACU006818/1-484 MSAQIEGGVH GLHSYEKRLY bmy_14113T0/1-537 MSAQIEGGVH GLHSYEKRLY ENSBTAP00000000374/1-571 MSAQIEGGVH GLHSYEKRLY