KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:54 2014 Check: 00 .. Name: ENSTTRP00000008383/1-200 Len: 205 Check: 9946 Weight: 1.00 Name: ENSP00000475750/1-205 Len: 205 Check: 5749 Weight: 1.00 Name: ENSBTAP00000000304/1-205 Len: 205 Check: 6437 Weight: 1.00 Name: bmy_01793T0/1-181 Len: 205 Check: 8589 Weight: 1.00 Name: BACU014343/1-144 Len: 205 Check: 3311 Weight: 1.00 // 1 50 ENSTTRP00000008383/1-200 MAEVLEPDPG AAEGSEA-LA ETPGWEAPED ASSQPGSYEI RHYGPAKWVS ENSP00000475750/1-205 MAEPLQPDPG AAEDAAAQAV ETPGWKAPED AGPQPGSYEI RHYGPAKWVS ENSBTAP00000000304/1-205 MAEVLEPDSR AAEGSEAPVV ETPGWEVPED AGPQPGSYEV RHYGPAKWVS bmy_01793T0/1-181 ---------- ---------- ----MRSVSR SYPQPGSYEI RRYGPAKWVS BACU014343/1-144 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008383/1-200 TSVESMDWDS AMQTGFTRLN GYIQGKNEKE MKIKMTAPVT SYV-PGS-PF ENSP00000475750/1-205 TSVESMDWDS AIQTGFTKLN SYIQGKNEKE MKIKMTAPVT SYVEPGSGPF ENSBTAP00000000304/1-205 TAVESMDWDS AMQTGFTRLK SYLQGKNEKE MKIKMTAPVT SYVEPGSGPF bmy_01793T0/1-181 TSVESTDWDS AMQTGFTRLN SYIQGRNEKE MKIKMTAPVT SYVEPGSGPF BACU014343/1-144 ---------- -MQTGFTRLN SYIQGRNEKE MKIKMTAPVT SYVEPGSGPF 101 150 ENSTTRP00000008383/1-200 SESTITISLY IPSQQ--SDP RPXXXXXXXX XXXXXXXXXX SFDGFSSAQR ENSP00000475750/1-205 SESTITISLY IPSEQQFDPP RPLESDVFIE DRAEMTVFVR SFDGFSSAQK ENSBTAP00000000304/1-205 SESTITISLY IPSEQQSDPP RPAESDVFIE DRAEMTVFVR SFDGFSSAQK bmy_01793T0/1-181 SESTITISLY IPSERQSDPP RPSESDVFIE DRAEMTVFVR SFDGFSSAQK BACU014343/1-144 SESTITISLY IPSERQSDPP RPSESDVFIE DRAEMTVFVR SFDGFSSAQK 151 200 ENSTTRP00000008383/1-200 NQEQLLTLAS ILREEGKVFD EKVYYTAAYN SPFELLDRKN EVWLIQKKEP ENSP00000475750/1-205 NQEQLLTLAS ILREDGKVFD EKVYYTAGYN SPVKLLNRNN EVWLIQKNEP ENSBTAP00000000304/1-205 NQEQLLTLAS ILREEGKVFD EKVYYTAGYN SPFKLLDRNN EVWLIQKNEP bmy_01793T0/1-181 NQEQLLTLAS ILREEGKVFD EKVYYTAGYD SPFKLLDRKN EVWLIQKKEP BACU014343/1-144 NQEQLLTLAS ILREEGKVFD EKVYYTAGYD SPFKLLDRRN EVWLIQKKEP 201 250 ENSTTRP00000008383/1-200 SEEKE ENSP00000475750/1-205 TKENE ENSBTAP00000000304/1-205 SKERE bmy_01793T0/1-181 SKERE BACU014343/1-144 SKESE