KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:39 2014 Check: 00 .. Name: ENSP00000381231/1-551 Len: 583 Check: 1142 Weight: 1.00 Name: ENSBTAP00000000184/1-571 Len: 583 Check: 9985 Weight: 1.00 Name: ENSTTRP00000009428/1-561 Len: 583 Check: 1825 Weight: 1.00 Name: bmy_14090T0/1-477 Len: 583 Check: 4136 Weight: 1.00 Name: BACU004387/1-565 Len: 583 Check: 7120 Weight: 1.00 // 1 50 ENSP00000381231/1-551 MPSETPQAEV --GPTGCPHR SGPHSAKGSL EKGSPEDKEA KEPLWIRPDA ENSBTAP00000000184/1-571 MPFETSPADT LCRSAGCPHL SGAHLGRGSL EKEPPEDKEA KELLWIRPDA ENSTTRP00000009428/1-561 MPSETPQAEE --RSAGCPHL SGAHLGKGSL EKEPPGD--- KEVLWIRPDA bmy_14090T0/1-477 ---------- ---------- ---------- ---------- ---------- BACU004387/1-565 MPSETPQAEE --RSAGCPHL SGARLGKGSL EKEPPGDKED KEVLWIRPDA 51 100 ENSP00000381231/1-551 PSRCTWQLGR PASESPHHHT APAKSPKILP DILKKIGDTP MVRINKIGKK ENSBTAP00000000184/1-571 PSRCSWQLGR PVADSPHCHA ALVKSPKILP DILKKIGDTP MVRINKIGRN ENSTTRP00000009428/1-561 PSRCSWQLGR PATSSPHRHT ALEKSPKILP DILKKIGDTP MVRINKIGRN bmy_14090T0/1-477 ---------- ---------- ---------- ---------- MVRVNKIGRN BACU004387/1-565 PSRCSWQLGR PATNSPHHHT ALAKSPKILP DILKKIGDTP MVRVNKIGRN 101 150 ENSP00000381231/1-551 FGLKCELLAK CEFFNAGGSV KDRISLRMIE DAERDGTLKP GDTIIEPTSG ENSBTAP00000000184/1-571 FGLKCELLAK CEFFNAGGSV KDRISLRMIE DAEREGTIKP GDTIIEPTSG ENSTTRP00000009428/1-561 FGLKCELLAK CEFFNAGGSV KDRISLRMIE DAEREGTLKP GDTIIEPTSG bmy_14090T0/1-477 FGLKCELLAK CEFFNAGGSV KDRISLRMIE DAEREGTLKP GDTIIEPTSG BACU004387/1-565 FGLKCELLAK CEFFNAGGSV KDRISLRMIE DAEREGTLKP GDTIIEPTSG 151 200 ENSP00000381231/1-551 NTGIGLALAA AVRGYRCIIV MPEKMSSEKV DVLRALGAEI VRTPTNARFD ENSBTAP00000000184/1-571 NTGIGLALAA AVKGYRCIIV MPEKMSTEKV DVLRALGAEI VRTPTNARFD ENSTTRP00000009428/1-561 NTGIGLALAA AVKGYHCIIV MPEKMSTEKV DVLRALGAEI VRTPTNARFD bmy_14090T0/1-477 NTGIGLALAA AVKGYHCIIV MPEKMSTEKV DVLRALGAEI VRTPTNARFD BACU004387/1-565 NTGIGLALAA AVKGYHCIIV MPEKMSTEKV DVLRALGAEI VRTPTNARFD 201 250 ENSP00000381231/1-551 SPESHVGVAW RLKNEIPNSH ILDQYRNASN PLAHYDTTAD EILQQCDGKL ENSBTAP00000000184/1-571 SPESHVGVAW RLRNEIPNSH ILDQYRNASN PLAHYDITAE EILQQCDGRL ENSTTRP00000009428/1-561 SPESHVGVAW RLRNEIPNSH ILDQYRNASN PLAHYDITAE EILQQCDXXL bmy_14090T0/1-477 SPESHVGVAW RLRNEIPNSH ILDQYRNASN PLAHYDITAE EILQQCDGRL BACU004387/1-565 SPESHVGVAW RLRNEIPNSH ILDQYRNASN PLAHYDITAE EILQQCDGRL 251 300 ENSP00000381231/1-551 DMLVASVGTG GTITGIARKL KEKCPGCRII GVDPEGSILA EPEELNQTEQ ENSBTAP00000000184/1-571 DMLVASAGTG GTITGVARKL KEKCPGCKIV GVDPEGSILA EPEELNQTEQ ENSTTRP00000009428/1-561 DMLVASAGTG GTITGIARKL KEKCPGCKII GVDPEGSILA EPEELNQTEQ bmy_14090T0/1-477 DMLVASAGTG GTITGIARKL KEKCPGCQII GVDPEGSILA EPEELNQTEQ BACU004387/1-565 DMLVASAGTG GTITGIARKL KEKCPGCQII GVDPEGSILA EPEELNQTEQ 301 350 ENSP00000381231/1-551 TTYEVEGIGY DFIPTVLDRT VVDKWFKSND EEAFTFARML IAQEGLLCGG ENSBTAP00000000184/1-571 TAYEVEGIGY DFIPTVLDRT VVDKWFKSND EEAFAFARML IAQEGLLCGG ENSTTRP00000009428/1-561 TAYEVEGIGY DFIPTVLDRT VVDTWFKSND EDAFAFARML IAQEGLLCGG bmy_14090T0/1-477 TAYEVEGIGY DFIPTVLDRT VVDRWFKSND EDAFAFARML IAQEGLLCGG BACU004387/1-565 LAYEVEGIGY DFIPTVLDRT VVDRWFKSND EDAFAFARML IAQEGLLCGG 351 400 ENSP00000381231/1-551 SAGSTVAVAV KAAQELQEGQ RCVVILPDSV RNYMTKFLSD RWMLQKGFLK ENSBTAP00000000184/1-571 SSGSAMSVAV KAAQELQEGQ RCVVILPDSV RNYMSKFLSD KWMLQKGFMK ENSTTRP00000009428/1-561 SAGSAMSVAV KAAQELREEQ RCVVILPDSV RNYMSKFLSD KWMLQKGFMK bmy_14090T0/1-477 SAGSAMSVAV KAAQELREEQ RCVVILPDSV RNYMSKFLSD KWMLQKGFMK BACU004387/1-565 SAGSAMSVAV KAAQELREEQ RCVVILPDSV RNYMSKFLSD RWMLQKGFMK 401 450 ENSP00000381231/1-551 EEDLTEKKPW WWHLRVQELG LSAPLTVLPT ITCGHTIEIL REKGFDQAPV ENSBTAP00000000184/1-571 EEEISVKRPW WWHLQVQELS LSAPLTVLPT VTCEHTIEIL REKGFDQAPV ENSTTRP00000009428/1-561 EEDLLVKKPW WWHLRVQELS LSAPLTVLPT VTCEHTIDIL REKGFDQAPV bmy_14090T0/1-477 EEDLLVKKPW WWHLRVQELS LSAPLTVLPT VTCEHTIEIL REKGFDQAPV BACU004387/1-565 EEDLLVKKPW WWHLRVQELS LSAPLTVLPT VTCEHTIEIL REKGFDQAPV 451 500 ENSP00000381231/1-551 VDEAGVILGM VTLGNMLSSL LAGKVQPSDQ VGKVIYKQFK QIRLTDTLGR ENSBTAP00000000184/1-571 VDESGVILGM VTLGNMLSSL LAGKVQPSDQ VCKVIYKQFK QIYLTDPLGK ENSTTRP00000009428/1-561 VDESGVILGM VTLGNMLSSL LAGKVQPSDQ VRKVIYKQFK QIHLTDPLGK bmy_14090T0/1-477 VDESGVILGM VTLGNMLSSL LAGKVQPSDQ VRKIIYKQFK QIHLTDPLGK BACU004387/1-565 VDESGVILGM VTLGNMLSSL LAGKVQPSDQ VRKVIYKQFK QIHLTDPLGK 501 550 ENSP00000381231/1-551 LSHILEMDHF ALVVHEQIQY ---------- --HSTGKSSQ RQMVFGVVTA ENSBTAP00000000184/1-571 LSHILEMDHF ALVVHEQIQY ---------- --RCHGESSK RQMVFGVVTA ENSTTRP00000009428/1-561 LSHILEMDHF ALVVHEQIQS RDLALGMGGP ADHSHGESSK RQMVFGVVTA bmy_14090T0/1-477 LSHILEMDHF ALVVHEQIQY ---------- --HSHGESSK RQMVFGVVTA BACU004387/1-565 LSHILEMDHF ALVVHEQIQY ---------- --HSHGESSK RQMVFGVVTA 551 600 ENSP00000381231/1-551 IDLLNFVAAQ ERDQK----- ---------- --- ENSBTAP00000000184/1-571 IDLLNFVATR ERNQRTKPES ALKLGGVGAE AQL ENSTTRP00000009428/1-561 IDLLNFVAAR ERNQKT---- ---------- --- bmy_14090T0/1-477 IDLLNFVAAR ERNQKTKSGS ----GGAGPA AQP BACU004387/1-565 IDLLNFVAAR ERNQKTKSAS ----GGAGAA AQP